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S21_scaffold_81_curated

Search features with annotation key words

Displaying items 1-30 of 161 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S21_scaffold_81_curated_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..477)
DNA (477bp) protein (159aa)
electron transfer flavoprotein subunit beta n=1 Tax=Pseudomonas stutzeri RepID=UPI0003123DDF
electron transporter RnfB
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:AGA86254.1}; TaxID=644801 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri RCH2.;"
S21_scaffold_81_curated_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

809..2464
DNA (1656bp) protein (552aa)
Electron transfer flavoprotein-ubiquinone oxidoreductase n=3 Tax=Pseudomonas stutzeri RepID=A4VMQ6_PSEU5 rbh
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:EPL62391.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
electron transfer flavoprotein-ubiquinone oxidoreductase rbh
S21_scaffold_81_curated_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2526..3092)
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Pseudomonas stutzeri RepID=A4VMQ7_PSEU5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EPL62390.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_81_curated_4
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3143..3754)
DNA (612bp) protein (204aa)
Putative lipoprotein n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N4U9_PSEU6 rbh
putative lipoprotein rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_81_curated_5
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3864..4760)
DNA (897bp) protein (299aa)
Oxygen-independent coproporphyrinogen III oxidase, putative n=3 Tax=Pseudomonas stutzeri RepID=A4VMQ9_PSEU5 rbh
oxygen-independent coproporphyrinogen III oxidase rbh
Oxygen-independent coproporphyrinogen III oxidase, putative {ECO:0000313|EMBL:AEJ05872.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_81_curated_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4782..5402)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=4 Tax=Pseudomonas stutzeri RepID=A4VMR0_PSEU5 rbh
TetR family transcriptional regulator rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABP80261.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_81_curated_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5477..6610
DNA (1134bp) protein (378aa)
Aminotransferase, class V n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N4W5_PSEU6 rbh
class V aminotransferase rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA84612.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_81_curated_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6828..8222)
DNA (1395bp) protein (465aa)
Aromatic amino acid transport protein AroP1 n=2 Tax=Pseudomonas stutzeri RepID=F8H3S6_PSEUT rbh
aroP; aromatic amino acid transport protein AroP1 rbh
Aromatic amino acid transport protein AroP1 {ECO:0000313|EMBL:AEJ05875.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_81_curated_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8302..9087)
DNA (786bp) protein (262aa)
TatD family deoxyribonuclease n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JRD8_PSEST rbh
TatD family deoxyribonuclease {ECO:0000313|EMBL:EPL62384.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
TatD family deoxyribonuclease rbh
S21_scaffold_81_curated_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9201..9557)
DNA (357bp) protein (119aa)
Type 4 fimbrial biogenesis protein PilZ n=4 Tax=Pseudomonas stutzeri RepID=A4VMR4_PSEU5
pilZ-2; type 4 fimbrial biogenesis protein PilZ
Type 4 fimbrial biogenesis protein PilZ {ECO:0000313|EMBL:AEJ05877.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_81_curated_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9589..10575)
DNA (987bp) protein (329aa)
DNA polymerase III subunit delta {ECO:0000313|EMBL:EPL62382.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EPL62382.1};; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
holB; DNA polymerase III subunit delta' (EC:2.7.7.7) rbh
DNA polymerase III subunit delta n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JWF2_PSEST rbh
S21_scaffold_81_curated_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10568..11200)
DNA (633bp) protein (211aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
Thymidylate kinase n=2 Tax=Pseudomonas stutzeri RepID=KTHY_PSEU5 rbh
tmk; thymidylate kinase rbh
S21_scaffold_81_curated_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11197..12267)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=2 Tax=Pseudomonas stutzeri RepID=A4VMR7_PSEU5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEJ05880.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_81_curated_14
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12264..13085)
DNA (822bp) protein (274aa)
pabC; 4-amino-4-deoxychorismate lyase (EC:4.1.3.38) rbh
4-amino-4-deoxychorismate lyase n=2 Tax=Bacteria RepID=A4VMR8_PSEU5 rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_81_curated_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13082..14326)
DNA (1245bp) protein (415aa)
fabF; 3-oxoacyl-(acyl carrier protein) synthase II (EC:2.3.1.41) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GLG9_PSEST rbh
S21_scaffold_81_curated_16
GWC2_Pseudomonadales_63_15_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14491..14727)
DNA (237bp) protein (79aa)
Acyl carrier protein n=17 Tax=Pseudomonadaceae RepID=ACP_AZOVD
acpP; acyl carrier protein
Tax=GWC2_Pseudomonadales_63_15_curated
S21_scaffold_81_curated_17
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14921..15664)
DNA (744bp) protein (248aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=4 Tax=Pseudomonas stutzeri RepID=A4VMS1_PSEU5 rbh
fabG-1; 3-ketoacyl-ACP reductase rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_81_curated_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15679..16617)
DNA (939bp) protein (313aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
ACP S-malonyltransferase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002F12B38 rbh
fabD; malonyl-CoA-[acyl-carrier-protein] transacylase rbh
S21_scaffold_81_curated_19
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16679..17719)
DNA (1041bp) protein (347aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
Phosphate acyltransferase n=4 Tax=Pseudomonas stutzeri RepID=PLSX_PSEU5 rbh
plsX; phosphate acyltransferase rbh
S21_scaffold_81_curated_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17753..17935)
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=8 Tax=Pseudomonas stutzeri subgroup RepID=RL32_PSEU5
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_81_curated_21
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17948..18475)
DNA (528bp) protein (176aa)
Predicted metal-binding, possibly nucleic acid-binding protein n=2 Tax=Pseudomonas stutzeri RepID=A4VMS5_PSEU5 rbh
metal-binding protein rbh
Metal-binding protein {ECO:0000313|EMBL:EPL62372.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_81_curated_22
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18580..19158
DNA (579bp) protein (193aa)
Maf-like protein PST_2627 n=2 Tax=Pseudomonas stutzeri RepID=A4VMS6_PSEU5 rbh
maf-1; Maf-like protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
S21_scaffold_81_curated_23
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19177..20160)
DNA (984bp) protein (328aa)
Putative peptidase n=4 Tax=Pseudomonas stutzeri RepID=A4VMS7_PSEU5 rbh
sppA; putative peptidase rbh
Putative peptidase {ECO:0000313|EMBL:AEJ05890.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_81_curated_24
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20150..20836)
DNA (687bp) protein (229aa)
HAD family hydrolase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002D6E2A9 rbh
HAD superfamily hydrolase rbh
HAD superfamily hydrolase {ECO:0000313|EMBL:EPL62369.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_81_curated_25
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20829..21782)
DNA (954bp) protein (318aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
Pseudouridine synthase n=3 Tax=Pseudomonas stutzeri RepID=F2N4Y3_PSEU6 rbh
rluC; ribosomal large subunit pseudouridine synthase C rbh
S21_scaffold_81_curated_26
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22334..25501
DNA (3168bp) protein (1056aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
Ribonuclease E n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VMT0_PSEU5 rbh
rne; ribonuclease E rbh
S21_scaffold_81_curated_27
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25722..26741)
DNA (1020bp) protein (340aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6L0M6_PSEST rbh
murB; UDP-N-acetylenolpyruvoylglucosamine reductase rbh
S21_scaffold_81_curated_28
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26738..27205)
DNA (468bp) protein (156aa)
Protein-tyrosine-phosphatase n=2 Tax=Pseudomonas stutzeri RepID=F2N4Y6_PSEU6 rbh
protein-tyrosine-phosphatase rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA84633.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_81_curated_29
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27207..27971)
DNA (765bp) protein (255aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=2 Tax=Pseudomonas stutzeri RepID=F2N4Y7_PSEU6 rbh
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase rbh
S21_scaffold_81_curated_30
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27968..28153)
DNA (186bp) protein (62aa)
UPF0434 protein PST_2635 n=4 Tax=Pseudomonas stutzeri RepID=Y2635_PSEU5
hypothetical protein
UPF0434 protein B382_11581 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
Displaying items 1-30 of 161 in total

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