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S21_scaffold_48_curated

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Displaying items 1-30 of 232 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S21_scaffold_48_curated_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

378..1688
DNA (1311bp) protein (437aa)
phosphohydrolase n=1 Tax=Acidovorax radicis RepID=UPI0002377EE3 rbh
metal dependent phosphohydrolase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1698..2303)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EE2 rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2491..3375
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EE1 rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S21_scaffold_48_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3338..4891
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EE0 rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4908..8171
DNA (3264bp) protein (1088aa)
DNA polymerase III, alpha subunit n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1Q3_9BURK rbh
DNA polymerase III subunit alpha rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8214..8729)
DNA (516bp) protein (172aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EDE rbh
membrane protein-like metalloendopeptidase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8773..11064)
DNA (2292bp) protein (764aa)
membrane assembly protein AsmA n=1 Tax=Acidovorax radicis RepID=UPI0002377EDD rbh
AsmA family protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11302..12186
DNA (885bp) protein (295aa)
pseudouridine synthase n=1 Tax=Acidovorax radicis RepID=UPI0002377EDC rbh
pseudouridine synthase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12340..14370
DNA (2031bp) protein (677aa)
methyl-accepting chemotaxis protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EDB rbh
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14417..14779)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EDA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_trna_1
unknown

Not on your lists

15013..15083
DNA (71bp)
transferRNA Gly
S21_scaffold_48_curated_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15284..16429
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TRL5_ACIAC rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16498..17988)
DNA (1491bp) protein (497aa)
Succinic semialdehyde dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9V7_9BURK rbh
succinate-semialdehyde dehydrogenase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18122..18943)
DNA (822bp) protein (274aa)
polyamine ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002377ED4 rbh
binding-protein-dependent transport system inner membrane protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_14
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18965..20230)
DNA (1266bp) protein (422aa)
polyamine ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002377ED3 rbh
binding-protein-dependent transport system inner membrane protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20265..21296)
DNA (1032bp) protein (344aa)
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002377ED2 rbh
family 1 extracellular solute-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21363..22463)
DNA (1101bp) protein (367aa)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002377ED1 rbh
ABC transporter-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22507..23799)
DNA (1293bp) protein (431aa)
4-aminobutyrate aminotransferase n=1 Tax=Acidovorax radicis RepID=UPI0002377B88 rbh
4-aminobutyrate aminotransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24161..25969)
DNA (1809bp) protein (603aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377B87 rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_19
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26449..27867
DNA (1419bp) protein (473aa)
GntR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377B86 rbh
GntR family transcriptional regulator rbh
Tax=GWA2_Burkholderiales_64_37_curated
S21_scaffold_48_curated_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28023..28697)
DNA (675bp) protein (225aa)
GntR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377B85 rbh
GntR family transcriptional regulator rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S21_scaffold_48_curated_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28765..29784)
DNA (1020bp) protein (340aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002377B84 rbh
ABC transporter substrate-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29843..31108)
DNA (1266bp) protein (422aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0W1_9BURK rbh
TRAP dicarboxylate transporter subunit DctM rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31134..31769)
DNA (636bp) protein (212aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002377B82 rbh
tripartite ATP-independent periplasmic rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_24
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31920..33287)
DNA (1368bp) protein (456aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Acidovorax radicis RepID=UPI0002377B81 rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33284..33571)
DNA (288bp) protein (96aa)
ferredoxin-containing oxidase n=1 Tax=Acidovorax radicis RepID=UPI0002377B80
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33568..34734)
DNA (1167bp) protein (389aa)
D-amino acid oxidase n=1 Tax=Acidovorax radicis RepID=UPI0002377B7F rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_27
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34712..35647)
DNA (936bp) protein (312aa)
hydroxyproline-2-epimerase n=1 Tax=Acidovorax radicis RepID=UPI0002377B7E rbh
proline racemase rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S21_scaffold_48_curated_28
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35685..36602)
DNA (918bp) protein (306aa)
dihydrodipicolinate synthase n=1 Tax=Acidovorax radicis RepID=UPI0002377B7D rbh
dihydrodipicolinate synthetase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_48_curated_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


36858..39485
DNA (2628bp) protein (876aa)
alaS; alanyl-tRNA ligase (EC:6.1.1.7) rbh
Alanine--tRNA ligase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1T6_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying items 1-30 of 232 in total

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