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S21_scaffold_20_curated

Search features with annotation key words

Displaying items 1-30 of 497 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S21_scaffold_20_curated_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(646..2040)
DNA (1395bp) protein (465aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI00023751A6 rbh
sensor signal transduction histidine kinase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2219..3052)
DNA (834bp) protein (278aa)
transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023751A5 rbh
two component transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3163..4413
DNA (1251bp) protein (417aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI00023751A4 rbh
extracellular solute-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4471..5655
DNA (1185bp) protein (395aa)
maltoporin n=1 Tax=Acidovorax radicis RepID=UPI00023751A3 rbh
maltoporin rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5777..6658
DNA (882bp) protein (294aa)
sugar ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI00023751A2 rbh
binding-protein-dependent transport system inner membrane protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6648..7517
DNA (870bp) protein (290aa)
sugar ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI00023751A1 rbh
binding-protein-dependent transport system inner membrane protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S21_scaffold_20_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7526..8593
DNA (1068bp) protein (356aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6L1_9BURK rbh
ABC transporter-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8795..9772
DNA (978bp) protein (326aa)
Glucokinase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZW4_9BURK rbh
glucokinase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9769..10209
DNA (441bp) protein (147aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZW5_9BURK
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S21_scaffold_20_curated_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10287..11291)
DNA (1005bp) protein (335aa)
Transketolase central region id=1278661 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
transketolase central region rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11288..12142)
DNA (855bp) protein (285aa)
Transketolase domain protein id=1278660 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
transketolase domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_12
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12180..13439)
DNA (1260bp) protein (420aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZG1_LEPCP rbh
TRAP dicarboxylate transporter subunit DctM rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S21_scaffold_20_curated_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13469..13984)
DNA (516bp) protein (172aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZG0_LEPCP
tripartite ATP-independent periplasmic transporter DctQ
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_14
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14069..15055)
DNA (987bp) protein (329aa)
TRAP dicarboxylate transporter, DctP subunit id=1278657 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
TRAP dicarboxylate transporter subunit Dctp rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15100..15849)
DNA (750bp) protein (250aa)
dehydrogenase (EC:1.1.1.100) rbh
Short-chain dehydrogenase/reductase SDR id=1278656 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16027..16911
DNA (885bp) protein (295aa)
LysR family transcriptional regulator id=5083449 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
LysR family transcriptional regulator rbh
Tax=GWA2_Burkholderiales_64_37_curated
S21_scaffold_20_curated_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16962..18416)
DNA (1455bp) protein (485aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) rbh
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZW6_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18603..20252
DNA (1650bp) protein (550aa)
glucose-6-phosphate isomerase (EC:5.3.1.9) rbh
Glucose-6-phosphate isomerase n=1 Tax=Acidovorax sp. CF316 RepID=J1EKP5_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_19
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20362..21588
DNA (1227bp) protein (409aa)
Glucose-6-phosphate isomerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6L4_9BURK rbh
glucose-6-phosphate isomerase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_20
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21662..22147)
DNA (486bp) protein (162aa)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_21
unknown

Not on your lists

22162..22902
DNA (741bp) protein (247aa)

This feature has no annotations

S21_scaffold_20_curated_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23209..24978
DNA (1770bp) protein (590aa)
phosphogluconate dehydratase (EC:4.2.1.12) rbh
Phosphogluconate dehydratase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZW9_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25140..25769
DNA (630bp) protein (210aa)
ketohydroxyglutarate aldolase n=1 Tax=Acidovorax radicis RepID=UPI0002375196 rbh
2-dehydro-3-deoxyphosphogluconate aldolase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_24
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25992..26291
DNA (300bp) protein (100aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002378656
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
S21_scaffold_20_curated_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26648..28720
DNA (2073bp) protein (691aa)
tonb-dependent siderophore receptor n=1 Tax=Acidovorax radicis RepID=UPI0002378655 rbh
TonB-dependent siderophore receptor rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28869..30521)
DNA (1653bp) protein (551aa)
molecular chaperone GroEL n=1 Tax=Acidovorax radicis RepID=UPI0002378654 rbh
groEL; chaperonin GroEL rbh
Tax=GWA2_Burkholderiales_64_37_curated
S21_scaffold_20_curated_27
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30616..30906)
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZX2_9BURK
groES; co-chaperonin GroES
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_28
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31299..31670
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QAA9_ACIAP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31675..33174
DNA (1500bp) protein (500aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:5.3.1.8) rbh
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QAB0_ACIAP rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S21_scaffold_20_curated_30
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33178..33981
DNA (804bp) protein (268aa)
Wzm n=1 Tax=Comamonas sp. B-9 RepID=UPI000395D3C4 rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying items 1-30 of 497 in total

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