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S22_scaffold_87_curated

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S22_scaffold_87_curated_1
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:KGE80738.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
S22_scaffold_87_curated_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(367..603)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5C0J8_RHILU
Uncharacterized protein {ECO:0000313|EMBL:KAJ35617.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
S22_scaffold_87_curated_3
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

837..1202
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q4W7_9RHIZ
Histidine kinase {ECO:0000313|EMBL:KGE80736.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
S22_scaffold_87_curated_4
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1217..1462
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q4S6_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI12279.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
S22_scaffold_87_curated_5
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1910..2323)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q8B6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGE80734.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
S22_scaffold_87_curated_6
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2402..3175)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q4U3_9RHIZ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI08730.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
S22_scaffold_87_curated_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3481..3840)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI000377ADD9
Uncharacterized protein {ECO:0000313|EMBL:EPR23415.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
S22_scaffold_87_curated_8
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4258..5022
DNA (765bp) protein (255aa)
Mutagenesis protein ImuA n=2 Tax=Rhizobium RepID=U4Q8C4_9RHIZ rbh
imuA2; mutagenesis protein ImuA rbh
Mutagenesis protein ImuA {ECO:0000313|EMBL:CDI12287.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
S22_scaffold_87_curated_9
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5114..6454
DNA (1341bp) protein (447aa)
Mutagenesis protein ImuB n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q4X7_9RHIZ rbh
imuB2; mutagenesis protein ImuB rbh
Mutagenesis protein ImuB {ECO:0000313|EMBL:CDI12288.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
S22_scaffold_87_curated_10
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6451..9708
DNA (3258bp) protein (1086aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
Error-prone DNA polymerase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5DQQ8_RHILU rbh
dnaE; DNA polymerase III, alpha chain rbh
S22_scaffold_87_curated_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9761..10600)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023764CE
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000313|EMBL:KAJ32721.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
S22_scaffold_87_curated_12
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10720..10902)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KAJ32726.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
S22_scaffold_87_curated_13
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11097..11264
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K4D1_AGRVS
helicase
Uncharacterized protein {ECO:0000313|EMBL:GAK72284.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
S22_scaffold_87_curated_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11418..12656
DNA (1239bp) protein (413aa)
integrase/recombinase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289EEB7 rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:CDN95740.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
site-specific recombinase XerD rbh
S22_scaffold_87_curated_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12653..13615
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEL2_AFIFE rbh
Phage integrase family protein {ECO:0000313|EMBL:CDN95741.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
tyrosine recombinase XerD
S22_scaffold_87_curated_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13608..14612
DNA (1005bp) protein (335aa)
integrase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287AE65 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26805.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
integrase
S22_scaffold_87_curated_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14661..15176)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HL57_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KAJ33018.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Hypothetical protein
S22_scaffold_87_curated_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15219..15578
DNA (360bp) protein (120aa)
ArsR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNG9_9RHIZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:KAJ33017.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
ArsR family transcriptional regulator
S22_scaffold_87_curated_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15571..16782
DNA (1212bp) protein (404aa)
Major facilitator transporter n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HHH7_RHIRD rbh
Major facilitator transporter {ECO:0000313|EMBL:KAJ33016.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
major facilitator transporter
S22_scaffold_87_curated_20
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16779..17489)
DNA (711bp) protein (237aa)
Arsenical resistance protein ArsH n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HHH5_RHIRD rbh
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KAJ33015.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
NADPH-dependent FMN reductase
S22_scaffold_87_curated_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17482..17907)
DNA (426bp) protein (142aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
arsenate reductase (EC:1.20.4.1)
Arsenate reductase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AY39_RHIRD
S22_scaffold_87_curated_22
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17910..18968)
DNA (1059bp) protein (353aa)
Arsenite efflux pump protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HL50_9RHIZ rbh
Arsenite efflux pump protein {ECO:0000313|EMBL:EPE94121.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
aCR3; Arsenite efflux pump ACR3
S22_scaffold_87_curated_23
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18968..19495)
DNA (528bp) protein (176aa)
Arsenate reductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTW7_9RHIZ
Arsenate reductase {ECO:0000313|EMBL:GAK73174.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
arsC; Putative arsenate reductase ArsC
S22_scaffold_87_curated_24
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19511..19954)
DNA (444bp) protein (148aa)
Arsenate reductase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UH36_RHIRD
Arsenate reductase {ECO:0000313|EMBL:KGE80621.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
acetyltransferase
S22_scaffold_87_curated_25
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19948..20301)
DNA (354bp) protein (118aa)
ArsR family transcriptional regulator n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UH37_RHIRD
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:EGP53906.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
S22_scaffold_87_curated_26
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20688..21671
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XZL8_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGE80726.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
S22_scaffold_87_curated_27
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21813..22421
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XZL9_RHIRD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK04928.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
S22_scaffold_87_curated_28
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22435..22836
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XZM0_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KGE80724.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
S22_scaffold_87_curated_29
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22939..24174
DNA (1236bp) protein (412aa)
Putative methylase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XZM1_RHIRD
Putative methylase {ECO:0000313|EMBL:EHH03525.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
hypothetical protein
S22_scaffold_87_curated_30
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24356..26302
DNA (1947bp) protein (649aa)
Putative methylase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XZM1_RHIRD rbh
Putative methylase {ECO:0000313|EMBL:CDN95737.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
methylase rbh
Displaying items 1-30 of 148 in total

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