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S22_scaffold_304_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S22_scaffold_304_curated_1
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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439..3873
DNA (3435bp) protein (1145aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HDJ7_9RHIZ rbh
Histidine kinase {ECO:0000313|EMBL:KGE80127.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
response regulator
S22_scaffold_304_curated_2
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3870..4703
DNA (834bp) protein (278aa)
Chemotaxis methyltransferase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HFE6_9RHIZ rbh
Chemotaxis protein CheR {ECO:0000313|EMBL:KGE80126.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
cheR methyltransferase, all-alpha domain protein
S22_scaffold_304_curated_3
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4700..5272
DNA (573bp) protein (191aa)
CheB methylesterase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HUE1_9RHIZ
Chemotaxis protein CheB {ECO:0000313|EMBL:KGE80125.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
cheB methylesterase family protein
S22_scaffold_304_curated_4
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5269..6822
DNA (1554bp) protein (518aa)
Histidine kinase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HDC1_9RHIZ rbh
response regulator
Histidine kinase {ECO:0000313|EMBL:KGE80124.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
S22_scaffold_304_curated_5
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6845..7216)
DNA (372bp) protein (124aa)
transcriptional regulator n=1 Tax=Rhizobium radiobacter RepID=UPI00037E672A
response regulator
Uncharacterized protein {ECO:0000313|EMBL:KGE80123.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
S22_scaffold_304_curated_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7331..7858)
DNA (528bp) protein (176aa)
Putative cation uptake system protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M664_RHIL3
putative cation uptake system protein
Putative cation uptake system protein {ECO:0000313|EMBL:CAK03274.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
S22_scaffold_304_curated_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7970..8638)
DNA (669bp) protein (223aa)
Mn2+/Fe2_transporter, NRAMP family n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BM72_RHILV rbh
Mn2+/Fe2_transporter, NRAMP family {ECO:0000313|EMBL:EJC71147.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
putative cation uptake system protein rbh
S22_scaffold_304_curated_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9091..9594
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003826852
Uncharacterized protein {ECO:0000313|EMBL:EJJ24641.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
S22_scaffold_304_curated_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9640..10143
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B940_RHILS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS60428.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
S22_scaffold_304_curated_10
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10216..12366
DNA (2151bp) protein (717aa)
catalase C (EC:1.11.1.6) rbh
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
Catalase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LFR5_AGRSH rbh
S22_scaffold_304_curated_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12493..13023
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MGJ9_RHIL3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK07920.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
S22_scaffold_304_curated_12
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13050..13535
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VQP6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ21227.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
S22_scaffold_304_curated_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13676..15034)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=2 Tax=Rhizobium fredii RepID=G9ADZ6_RHIFH
Transposase {ECO:0000313|EMBL:KAJ34157.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
S22_scaffold_304_curated_14
unknown

Not on your lists

comp(15031..15201)
DNA (171bp) protein (57aa)

This feature has no annotations

S22_scaffold_304_curated_15
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15305..15727
DNA (423bp) protein (141aa)
Putative IS256 family transposase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTN1_RHITR
Transposase {ECO:0000313|EMBL:KGE79640.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
putative IS256 family transposase
S22_scaffold_304_curated_16
unknown

Not on your lists

comp(16339..17082)
DNA (744bp) protein (248aa)

This feature has no annotations

S22_scaffold_304_curated_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17532..17795)
DNA (264bp) protein (88aa)
transposase IS4 n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036783BB
Transposase {ECO:0000313|EMBL:CDN95474.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
transposase DDE domain protein
S22_scaffold_304_curated_18
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18059..18253)
DNA (195bp) protein (65aa)
Tnp5 n=6 Tax=Bacteria RepID=B5TTS3_9BACT
DNA, insertion sequence IS1422 {ECO:0000313|EMBL:BAA97979.1}; Flags: Fragment;; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
IS5 family transposase
S22_scaffold_304_curated_19
unknown

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18419..18499
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 19 items

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