ggKbase home page

S22_scaffold_99_curated

Search features with annotation key words

Displaying items 1-30 of 120 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S22_scaffold_99_curated_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..277
DNA (276bp) protein (92aa)
Extensin family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IG30_XANP2
extensin family protein
Extensin family protein {ECO:0000313|EMBL:ABS66973.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

279..1040
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IG31_XANP2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABS66974.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1125..2651
DNA (1527bp) protein (509aa)
Acetyl-CoA hydrolase {ECO:0000313|EMBL:ABS66975.1}; EC=3.1.2.1 {ECO:0000313|EMBL:ABS66975.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Acetyl-CoA hydrolase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IG32_XANP2 rbh
Acetyl-CoA hydrolase rbh
S22_scaffold_99_curated_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2778..4277
DNA (1500bp) protein (500aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGN1_XANP2 rbh
phosphoglucomutase/phosphomannomutase subunit alpha/beta rbh
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II {ECO:0000313|EMBL:ABS67174.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4614..5558)
DNA (945bp) protein (315aa)
PfkB domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICB4_XANP2 rbh
ribokinase-like domain-containing protein rbh
PfkB domain protein {ECO:0000313|EMBL:ABS65657.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_6
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5617..6321)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICB5_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65658.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6331..7518)
DNA (1188bp) protein (396aa)
Aminotransferase class I and II n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICB6_XANP2 rbh
class I and II aminotransferase rbh
Aminotransferase class I and II {ECO:0000313|EMBL:ABS65659.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_8
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7691..8803
DNA (1113bp) protein (371aa)
FAD-dependent oxidoreductase n=1 Tax=Williamsia sp. D3 RepID=V8CYD8_9ACTO
FAD-dependent oxidoreductase {ECO:0000313|EMBL:ETD31731.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
glycine/D-amino acid oxidase
S22_scaffold_99_curated_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8837..9604
DNA (768bp) protein (256aa)
2-dehydro-3-deoxyglucarate aldolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IMH8_AZOC5 rbh
Alpha-dehydro-beta-deoxy-D-glucarate aldolase {ECO:0000313|EMBL:KJB94515.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
2-dehydro-3-deoxyglucarate aldolase rbh
S22_scaffold_99_curated_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9611..11137)
DNA (1527bp) protein (509aa)
AMP-dependent synthetase and ligase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IH47_XANP2 rbh
AMP-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS67340.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_11
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11381..11668)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBQ9_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65452.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11722..12417)
DNA (696bp) protein (232aa)
Putative cold-shock DNA-binding domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBQ8_XANP2 rbh
cold-shock DNA-binding domain-containing protein rbh
Putative cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ABS65451.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_13
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12874..13551
DNA (678bp) protein (226aa)
Nitroreductase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBQ7_XANP2 rbh
nitroreductase rbh
Nitroreductase {ECO:0000313|EMBL:ABS65450.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_14
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13558..13800)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBQ6_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65449.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13971..15578
DNA (1608bp) protein (536aa)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ABS65448.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ABS65448.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Gamma-glutamyltransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBQ5_XANP2 rbh
gamma-glutamyltransferase rbh
S22_scaffold_99_curated_16
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15652..16545
DNA (894bp) protein (298aa)
Glutamine cyclotransferase n=1 Tax=Thiocapsa marina 5811 RepID=F9UF02_9GAMM
Glutamine cyclotransferase {ECO:0000313|EMBL:EGV17039.1}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
glutamine cyclotransferase
S22_scaffold_99_curated_17
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17102..17689)
DNA (588bp) protein (196aa)
Transcriptional regulator, CarD family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBQ3_XANP2 rbh
CarD family transcriptional regulator rbh
Transcriptional regulator, CarD family {ECO:0000313|EMBL:ABS65446.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_18
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18264..19661
DNA (1398bp) protein (466aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Adenosylhomocysteinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBQ2_XANP2 rbh
S-adenosyl-L-homocysteine hydrolase rbh
S22_scaffold_99_curated_19
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20133..22019
DNA (1887bp) protein (629aa)
Probable potassium transport system protein kup n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=KUP_XANP2 rbh
K potassium transporter rbh
Probable potassium transport system protein kup {ECO:0000255|HAMAP-Rule:MF_01522}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22075..23247
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBQ0_XANP2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABS65443.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_21
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23376..24593
DNA (1218bp) protein (406aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBP9_XANP2 rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABS65442.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_22
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24590..25606
DNA (1017bp) protein (339aa)
Aminoglycoside phosphotransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBP8_XANP2 rbh
aminoglycoside phosphotransferase rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABS65441.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_23
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25610..26323)
DNA (714bp) protein (238aa)
Transcriptional regulator, TetR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IH54_XANP2 rbh
TetR family transcriptional regulator rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS67347.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_24
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26484..28280
DNA (1797bp) protein (599aa)
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA {ECO:0000256|HAMAP-Rule:MF_01728}; EC=3.6.3.42 {ECO:0000256|HAMAP-Rule:MF_01728};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Glucan exporter ATP-binding protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGM6_XANP2 rbh
cyclic beta-1,2-glucan ABc transporter rbh
S22_scaffold_99_curated_25
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28371..29867
DNA (1497bp) protein (499aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ABS67170.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ABS67170.1};; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGM7_XANP2 rbh
Serine-type D-Ala-D-Ala carboxypeptidase rbh
S22_scaffold_99_curated_26
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30035..31204
DNA (1170bp) protein (390aa)
Cobalamin synthesis protein P47K n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGM8_XANP2 rbh
cobalamin synthesis protein P47K rbh
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ABS67171.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_27
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31201..31758
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGM9_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS67172.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_28
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31748..33010)
DNA (1263bp) protein (421aa)
HI0933 family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGN0_XANP2 rbh
hypothetical protein rbh
HI0933 family protein {ECO:0000313|EMBL:ABS67173.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S22_scaffold_99_curated_29
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33116..35026
DNA (1911bp) protein (637aa)
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:ABS67412.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABS67412.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
DNA polymerase III, subunits gamma and tau n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IHB9_XANP2 rbh
DNA polymerase III subunits gamma and tau rbh
S22_scaffold_99_curated_30
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35128..35448
DNA (321bp) protein (107aa)
Nucleoid-associated protein Xaut_2167 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IHB8_XANP2
hypothetical protein
Nucleoid-associated protein Xaut_2167 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying items 1-30 of 120 in total

View Taxonomy