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S23_scaffold_576_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_576_curated_1
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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79..948
DNA (870bp) protein (290aa)
Uncharacterized protein n=3 Tax=Dehalobacter RepID=K4L159_9FIRM
DNA metabolism protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_576_curated_2
unknown

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998..1123
DNA (126bp) protein (42aa)

This feature has no annotations

S23_scaffold_576_curated_3
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1258..1992
DNA (735bp) protein (245aa)
NAD-dependent protein deacetylase {ECO:0000255|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000255|HAMAP-Rule:MF_01968}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
NAD-dependent protein deacetylase n=2 Tax=Clostridium acetobutylicum RepID=NPD_CLOAB rbh
NAD-dependent deacetylase rbh
S23_scaffold_576_curated_4
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1993..2340)
DNA (348bp) protein (116aa)
PII family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJL3_9FIRM
PII family protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_576_curated_5
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2362..2718)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000372AFE3
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_576_curated_6
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2721..4472)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LW67_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS63064.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein rbh
S23_scaffold_576_curated_7
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4708..5466
DNA (759bp) protein (253aa)
5'-nucleotidase SurE n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYW7_9FIRM
stationary-phase survival protein SurE
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_576_curated_8
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5454..6041
DNA (588bp) protein (196aa)
Isochorismatase hydrolase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DSI6_9FIRM
isochorismatase hydrolase
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_576_curated_9
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6058..6996
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1D9X7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:ESE30409.1}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium brachy ATCC 33089.;"
hypothetical protein
S23_scaffold_576_curated_10
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7370..8548
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGF09072.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KGF09072.1};; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
atoB; acetyl-CoA acetyltransferase (EC:2.3.1.9) rbh
Acetyl-CoA acetyltransferase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DV10_9FIRM rbh
S23_scaffold_576_curated_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8674..9324)
DNA (651bp) protein (217aa)
Putative integral membrane protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KH39_9FIRM
Integral membrane protein {ECO:0000313|EMBL:KJS23295.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
putative integral membrane protein
S23_scaffold_576_curated_12
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9331..9792)
DNA (462bp) protein (154aa)
Predicted transcriptional regulator, Lrp family n=2 Tax=Clostridium RepID=D8GJK4_CLOLD
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AGY74423.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
S23_scaffold_576_curated_13
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9871..10872)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LFS0_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA47015.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
S23_scaffold_576_curated_14
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11168..12832
DNA (1665bp) protein (555aa)
Glutaminyl-tRNA synthetase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EN00_9FIRM rbh
glutaminyl-tRNA synthetase
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_576_curated_15
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12849..14105
DNA (1257bp) protein (419aa)
Malic enzyme n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GLN7_EUBLK rbh
malic enzyme rbh
Malic enzyme {ECO:0000313|EMBL:ADO36661.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
S23_scaffold_576_curated_16
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14102..15487
DNA (1386bp) protein (462aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans MEV2011.;"
fumC; fumarate hydratase (EC:4.2.1.2) rbh
Fumarate hydratase class II n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6CFJ8_BACAZ rbh
S23_scaffold_576_curated_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15547..16986
DNA (1440bp) protein (480aa)
Succinate-semialdehyde dehydrogenase (NAD(P)+) n=1 Tax=Clostridium difficile E19 RepID=U3YJ00_CLODI rbh
sucD; succinate-semialdehyde dehydrogenase [NAD(P)+] rbh
Aldehyde-alcohol dehydrogenase domain protein {ECO:0000313|EMBL:EHJ25157.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
S23_scaffold_576_curated_18
Clostridium sp. CAG:508, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16902..19553)
DNA (2652bp) protein (884aa)
PAS n=1 Tax=Clostridium sp. CAG:508 RepID=R6Q5U0_9CLOT
PAS {ECO:0000313|EMBL:CDC32043.1}; TaxID=1262815 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:508.;"
PAS domain-containing protein
S23_scaffold_576_curated_19
unknown

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comp(19583..20131)
DNA (549bp) protein (183aa)

This feature has no annotations

S23_scaffold_576_curated_20
unknown

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comp(20171..20593)
DNA (423bp) protein (141aa)

This feature has no annotations

S23_scaffold_576_curated_21
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20962..21306
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2Z6_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU26363.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
S23_scaffold_576_curated_22
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21470..21913
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2DE62
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGB18888.1}; Flags: Precursor;; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
S23_scaffold_576_curated_23
unknown

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21946..23511
DNA (1566bp) protein (522aa)

This feature has no annotations

Displaying 23 items

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