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S23_scaffold_178_curated

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_178_curated_1
unknown

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comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

S23_scaffold_178_curated_2
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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201..740
DNA (540bp) protein (180aa)
50S ribosomal protein L21 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DPR2_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
50S ribosomal protein L21
S23_scaffold_178_curated_3
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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970..1230
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DSE9_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
rpmA; 50S ribosomal protein L27
S23_scaffold_178_curated_4
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1543..2832
DNA (1290bp) protein (430aa)
GTPase Obg n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1DBD7_9FIRM rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium brachy ATCC 33089.;"
obg; GTPase Obg rbh
S23_scaffold_178_curated_5
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2891..3664)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI000345B2AC
peptidase S24 and S26 domain-containing protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_6
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3819..4343
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK17_9FIRM
metal dependent phosphohydrolase
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_7

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4412..5068
DNA (657bp) protein (219aa)
Peptidase M23 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2N4_MAHA5
Marine sediment metagenome DNA, contig: S01H1_S03306 {ECO:0000313|EMBL:GAF90505.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase M23
S23_scaffold_178_curated_8
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5077..5949
DNA (873bp) protein (291aa)
Peptidase M50 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHL5_ALKOO
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ABW19297.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
S23_scaffold_178_curated_9
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5983..7833
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DPR9_9FIRM rbh
Fe-S oxidoreductase rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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7785..8516
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZ22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02409.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
S23_scaffold_178_curated_11
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8564..9238
DNA (675bp) protein (225aa)
ComEA protein n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CLI8_9FIRM
competence protein ComE
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

9297..9779
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F044_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02411.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
S23_scaffold_178_curated_13
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9793..10911
DNA (1119bp) protein (373aa)
spoIVB; peptidase (EC:3.4.21.116) rbh
Peptidase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B195_CLOA9 rbh
Peptidase S55 {ECO:0000313|EMBL:KJF28226.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
S23_scaffold_178_curated_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11228..11860
DNA (633bp) protein (211aa)
Stage 0 sporulation protein A n=1 Tax=Clostridium tetani 12124569 RepID=U6EZS5_CLOTA
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
stage 0 sporulation protein A
S23_scaffold_178_curated_15
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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11881..12084
DNA (204bp) protein (68aa)
UPF0291 protein EF62_1960 n=99 Tax=Enterococcus RepID=F0PFB4_ENTF6
UPF0291 protein EL26_14840 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
hypothetical protein
S23_scaffold_178_curated_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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12209..12616
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02415.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
S23_scaffold_178_curated_17
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12745..13917
DNA (1173bp) protein (391aa)
Cysteine desulfurase NifS n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1DBD4_9FIRM rbh
iscS2; cysteine desulfurase rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_18
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13917..14366
DNA (450bp) protein (150aa)
Fe-S iron-sulfur cluster assembly protein, NifU family n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CI04_9FIRM
NifU domain-containing protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_19
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14523..15479)
DNA (957bp) protein (319aa)
4Fe-4S binding domain protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F341_9FIRM rbh
aldo/keto reductase
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_20
unknown

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15593..15781
DNA (189bp) protein (63aa)

This feature has no annotations

S23_scaffold_178_curated_21
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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16062..18683
DNA (2622bp) protein (874aa)
Alanine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER55_9FIRM rbh
alaS; alanyl-tRNA synthetase rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_22
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18776..19024
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLK2_9FIRM
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

19255..19725
DNA (471bp) protein (157aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Putative Holliday junction resolvase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK33_9FIRM
Holliday junction resolvase YqgF
S23_scaffold_178_curated_24
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19727..20596
DNA (870bp) protein (290aa)
Methyltransferase domain protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FW65_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EEA86235.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
methyltransferase type 11
S23_scaffold_178_curated_25
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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20623..21456
DNA (834bp) protein (278aa)
Aminoglycoside N(3')-acetyltransferase {ECO:0000313|EMBL:EFM10679.1}; EC=2.3.1.81 {ECO:0000313|EMBL:EFM10679.1};; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK9.;"
aminoglycoside N(3')-acetyltransferase (EC:2.3.1.81) rbh
Aminoglycoside N(3')-acetyltransferase n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IAA2_9BACL rbh
S23_scaffold_178_curated_26
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21748..22170
DNA (423bp) protein (141aa)
Putative stress-responsive transcriptional regulator n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IIW1_THETR
putative stress-responsive transcriptional regulator
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_178_curated_27
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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22215..22856
DNA (642bp) protein (214aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XTN1_9FIRM
possible methyltransferase
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_178_curated_28
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23139..24452)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T2RLW7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB20831.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
transposase rbh
S23_scaffold_178_curated_29
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25200..26525
DNA (1326bp) protein (442aa)
anthranilate synthase component I (EC:4.1.3.27) rbh
Anthranilate synthase component I n=1 Tax=Desulfosporosinus sp. OT RepID=G2FR27_9FIRM rbh
Anthranilate synthase, aminase component {ECO:0000313|EMBL:KJR48477.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
S23_scaffold_178_curated_30
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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26525..27100
DNA (576bp) protein (192aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D280_DESAJ rbh
Anthranilate synthase, amidotransferase component {ECO:0000313|EMBL:KJR48476.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase rbh
Displaying items 1-30 of 69 in total

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