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S23_scaffold_587_curated

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_587_curated_1
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
ATP-dependent DNA helicase RecG n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQZ7_9FIRM
ATP-dependent DNA helicase RecG
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_587_curated_2
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(677..1066)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLU3_9FIRM
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_587_curated_3
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1584..1775)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E7K6_9FIRM
rpmB; ribosomal protein L28
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_587_curated_4
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(1888..2388)
DNA (501bp) protein (167aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6ERL5_9FIRM
S23_scaffold_587_curated_5
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(2385..4730)
DNA (2346bp) protein (782aa)
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2) rbh
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DVS3_9FIRM rbh
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDA92568.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
S23_scaffold_587_curated_6
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4945..6465
DNA (1521bp) protein (507aa)
Putative aminoacylhistidine dipeptidase {ECO:0000313|EMBL:BAL83333.1}; EC=3.4.13.- {ECO:0000313|EMBL:BAL83333.1};; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
Putative aminoacylhistidine dipeptidase n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GRE6_SELRL rbh
pepD; putative aminoacylhistidine dipeptidase rbh
S23_scaffold_587_curated_7
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6448..7329)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B9U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97054.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
S23_scaffold_587_curated_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7326..7781)
DNA (456bp) protein (152aa)
UPF0178 protein CLOSTMETH_01992 n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDR4_9CLOT
UPF0178 protein CLOSTMETH_01992 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
S23_scaffold_587_curated_9
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7812..8795)
DNA (984bp) protein (328aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
RNAse Z (EC:3.1.26.11) rbh
ribonuclease Z n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2DE7E rbh
S23_scaffold_587_curated_10
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8749..9153)
DNA (405bp) protein (135aa)
Predicted protein id=3119751 bin=GWF2_Bacteroidetes_39_10 species=Methanobacterium sp. AL-21 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_587_curated_11
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9181..10542)
DNA (1362bp) protein (454aa)
Radical SAM domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGN5_ALKOO rbh
radical SAM domain-containing protein rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_587_curated_12
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10904..11503)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI00031F97BA
putative low-complexity protein
Putative low-complexity protein {ECO:0000313|EMBL:AGK99459.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
S23_scaffold_587_curated_13
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11910..12263
DNA (354bp) protein (118aa)
Phospholipase C zinc-binding protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TKQ8_ALKMQ
phospholipase C zinc-binding protein
Phospholipase C zinc-binding protein {ECO:0000313|EMBL:ABR46776.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
S23_scaffold_587_curated_14
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12362..12664
DNA (303bp) protein (101aa)
Phospholipase C zinc-binding protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TKQ8_ALKMQ
phospholipase C zinc-binding protein
Phospholipase C zinc-binding protein {ECO:0000313|EMBL:ABR46776.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
S23_scaffold_587_curated_15
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12769..13407)
DNA (639bp) protein (213aa)
GPR1/FUN34/yaaH family protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GKI2_METPE
GPR1/FUN34/yaaH family protein
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:ACL15865.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
S23_scaffold_587_curated_16
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13532..15445)
DNA (1914bp) protein (638aa)
Sodium:solute symporter family protein id=4199507 bin=GWC2_Clostridiales_40_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
symporter
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_587_curated_17
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15442..15732)
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=4199508 bin=GWC2_Clostridiales_40_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_587_curated_18
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16133..17215)
DNA (1083bp) protein (361aa)
Uncharacterized protein id=1751851 bin=GWB2_Clostridiales_37_7 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_587_curated_19
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17405..17614
DNA (210bp) protein (70aa)
cold-shock protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289F583
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ABX41540.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
S23_scaffold_587_curated_20
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17735..19030
DNA (1296bp) protein (432aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDG5_9FIRM rbh
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EEG78686.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
subtilisin-like serine protease rbh
S23_scaffold_587_curated_21
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19116..20015
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I5N9_CLOCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL74706.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
S23_scaffold_587_curated_22
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20120..20731)
DNA (612bp) protein (204aa)
50S ribosomal protein L25 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHX7_ACEWD
rplY; 50S ribosomal protein L25
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_587_curated_23
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20835..22751)
DNA (1917bp) protein (639aa)
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2) rbh
Carbon-monoxide dehydrogenase, catalytic subunit n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6N4_CLOSW rbh
Carbon-monoxide dehydrogenase, catalytic subunit {ECO:0000313|EMBL:EXG85224.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
S23_scaffold_587_curated_24
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22918..23247)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q251F5_DESHY
N-acetyltransferase
Putative uncharacterized protein {ECO:0000313|EMBL:BAE82087.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
Displaying 24 items

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