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S23_scaffold_333_curated

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_333_curated_1
Halomonas sp. R57-5, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..302)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034A02DA
Uncharacterized protein {ECO:0000313|EMBL:CEP36064.1}; TaxID=1610576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. R57-5.;"
S23_scaffold_333_curated_2
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(374..622)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53610.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
S23_scaffold_333_curated_3
Lysinibacillus sphaericus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(625..1773)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Lysinibacillus sphaericus OT4b.31 RepID=R7Z8H9_LYSSH rbh
Uncharacterized protein {ECO:0000313|EMBL:EON70475.1}; TaxID=1285586 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sphaericus OT4b.31.;"
putative Abi-alpha protein rbh
S23_scaffold_333_curated_4
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1858..2361)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MES9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69293.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
S23_scaffold_333_curated_5
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2556..4232)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TDH2_9FIRM rbh
SecC motif-containing protein {ECO:0000313|EMBL:CEQ29784.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
S23_scaffold_333_curated_6
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4308..8015)
DNA (3708bp) protein (1236aa)
Uncharacterized protein n=1 Tax=Bacillus cereus MSX-A12 RepID=J8FIZ2_BACCE rbh
Tax=BJP_IG2157_Clostridiales_35_16
S23_scaffold_333_curated_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8511..9608)
DNA (1098bp) protein (366aa)
Transposase IS605 n=1 Tax=Geobacillus sp. JF8 RepID=S5Z0G4_9BACI rbh
Transposase {ECO:0000313|EMBL:KEZ85425.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
transposase IS605 rbh
S23_scaffold_333_curated_8
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9848..10153
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TME4_ALKMQ
Nucleotidase {ECO:0000313|EMBL:KJF27686.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
S23_scaffold_333_curated_9
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(10393..11082)
DNA (690bp) protein (230aa)
Aspartate racemase n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PXY6_9FUSO rbh
Aspartate racemase {ECO:0000313|EMBL:EHO77701.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
aspartate racemase rbh
S23_scaffold_333_curated_10
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11112..11672)
DNA (561bp) protein (187aa)
Putative uncharacterized protein id=3445527 bin=GWF2_Clostridiales_36_10 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_333_curated_11
unknown

Not on your lists

11858..11992
DNA (135bp) protein (45aa)

This feature has no annotations

S23_scaffold_333_curated_12
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12198..12494
DNA (297bp) protein (99aa)
Prevent-host-death family protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W6A0_DESOD
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AET68107.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
S23_scaffold_333_curated_13
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12469..12786
DNA (318bp) protein (106aa)
Plasmid stabilization system n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TKV5_ALKMQ
plasmid stabilization system protein
Plasmid stabilization system {ECO:0000313|EMBL:ABR46823.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
S23_scaffold_333_curated_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12768..14264)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WE04_9CLOT rbh
Aminotransferase class I and II family protein {ECO:0000313|EMBL:KIE46677.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein rbh
S23_scaffold_333_curated_15
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14559..15185
DNA (627bp) protein (209aa)
L-lysine exporter family protein LysE/ArgO n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3M4_BILWA
L-lysine exporter family protein LysE/ArgO {ECO:0000313|EMBL:EFV45420.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L-lysine permease
S23_scaffold_333_curated_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15163..15885)
DNA (723bp) protein (241aa)
SMC domain protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LZ05_CLOB8 rbh
SMC domain-containing protein
SMC domain protein {ECO:0000313|EMBL:ABR35585.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
S23_scaffold_333_curated_17
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15921..16187)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000378BF98
Uncharacterized protein {ECO:0000313|EMBL:EOC99680.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
S23_scaffold_333_curated_18
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16217..16495)
DNA (279bp) protein (93aa)
Conserved domain protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW06_9FIRM
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EGC81968.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
S23_scaffold_333_curated_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16495..17019)
DNA (525bp) protein (175aa)
Isochorismatase hydrolase id=2095154 bin=GWE2_RBX1_39_32 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
isochorismatase hydrolase
Tax=GWF2_RBX1_38_17_curated
S23_scaffold_333_curated_20
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17184..18284)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUV9_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV68489.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
S23_scaffold_333_curated_21
unknown

Not on your lists

comp(18323..18592)
DNA (270bp) protein (90aa)

This feature has no annotations

S23_scaffold_333_curated_22
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18624..19235)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPM7_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ83687.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
S23_scaffold_333_curated_23

Not on your lists

comp(19847..20158)
DNA (312bp) protein (104aa)
Putative stress-responsive transcriptional regulator n=3 Tax=Leuconostoc RepID=G7VLT7_LEUME
Uncharacterized protein {ECO:0000313|EMBL:KKT55823.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
stress-responsive transcriptional regulator
S23_scaffold_333_curated_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20534..20788)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF42419.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
S23_scaffold_333_curated_25
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20794..21279)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3GFT3_9BACL
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_333_curated_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21318..22199)
DNA (882bp) protein (294aa)
Phosphoesterase n=2 Tax=Clostridium botulinum B RepID=B2TPR7_CLOBB rbh
phosphoesterase rbh
Phosphoesterase {ECO:0000313|EMBL:ACD21940.1}; Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:CDH91058.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
S23_scaffold_333_curated_27
unknown

Not on your lists

comp(22219..23319)
DNA (1101bp) protein (367aa)

This feature has no annotations

S23_scaffold_333_curated_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23324..23776)
DNA (453bp) protein (151aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0NI29_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35937.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
S23_scaffold_333_curated_29
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(23871..24968)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Paenibacillus sp. A9 RepID=UPI00038155A1
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:CCY26562.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
copper amine oxidase-like domain-containing protein
S23_scaffold_333_curated_30
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25209..25577
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E304C4
hypothetical protein
Transcriptional repressor, CopY {ECO:0000313|EMBL:CDX01011.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
Displaying items 1-30 of 42 in total

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