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S23_scaffold_176_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_176_curated_1
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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267..1109
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FX48_DESHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACL18934.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
S23_scaffold_176_curated_2
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1332..2042
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MTG5_9FIRM
GntR family transcriptional regulator
Tax=BJP_IG2157_Clostridiales_52_13
S23_scaffold_176_curated_3
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2069..2401
DNA (333bp) protein (111aa)
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
S23_scaffold_176_curated_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

2394..4328
DNA (1935bp) protein (645aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5) rbh
Aldehyde ferredoxin oxidoreductase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QR56_ACEAZ rbh
Tax=RBG_19FT_COMBO_JS1_35_14_curated
S23_scaffold_176_curated_5
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4777..6702
DNA (1926bp) protein (642aa)
MutS domain V n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XV23_9FIRM rbh
MutS domain V rbh
Tax=BJP_IG2157_Clostridiales_35_16
S23_scaffold_176_curated_6
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6792..7475
DNA (684bp) protein (228aa)
UPI0003D1BCAE related cluster n=1 Tax=unknown RepID=UPI0003D1BCAE
Transcriptional regulator {ECO:0000313|EMBL:ETA67653.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
TetR family transcriptional regulator
S23_scaffold_176_curated_7
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7472..10030
DNA (2559bp) protein (853aa)
Pyruvate phosphate dikinase PEP/pyruvate-binding n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7N9_NATTJ rbh
pps; ABC-2 family transporter protein Pps
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_176_curated_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10214..12796
DNA (2583bp) protein (861aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K1L8_CLOPA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGK96463.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
S23_scaffold_176_curated_9
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13337..14155
DNA (819bp) protein (273aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W927_DESOD rbh
transcriptional regulator rbh
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:AET68236.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
S23_scaffold_176_curated_10
unknown

Not on your lists

14320..14685
DNA (366bp) protein (122aa)

This feature has no annotations

S23_scaffold_176_curated_11
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14745..20300
DNA (5556bp) protein (1852aa)
Multidomain protein with s-layer homology region, glug motif, ig motif, i-set domain, pkd domain n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TD58_HELMI rbh
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CFX17866.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
hypothetical protein
S23_scaffold_176_curated_12
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

20972..22714
DNA (1743bp) protein (581aa)
Aldehyde:ferredoxin oxidoreductase id=2024341 bin=GWB2_Clostridiales_37_7 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
Aldehyde:ferredoxin oxidoreductase rbh
Tax=GWB2_Clostridiales_37_7_curated
S23_scaffold_176_curated_13
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

22856..23185
DNA (330bp) protein (110aa)
ThiamineS protein (Modular protein) id=2024345 bin=GWB2_Clostridiales_37_7 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
ThiamineS protein (modular protein)
Tax=GWB2_Clostridiales_37_7_curated
S23_scaffold_176_curated_14
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

23211..24410
DNA (1200bp) protein (400aa)
Radical SAM domain protein id=2024351 bin=GWB2_Clostridiales_37_7 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
radical SAM protein rbh
Tax=GWB2_Clostridiales_37_7_curated
S23_scaffold_176_curated_15
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

24849..25727
DNA (879bp) protein (293aa)
Uncharacterized protein id=2281882 bin=GWB2_Clostridiales_37_7 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
Permease, drug/metabolite transporter (DMT) superfamily
Tax=GWB2_Clostridiales_37_7_curated
S23_scaffold_176_curated_16
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26002..26214
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS50024.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
S23_scaffold_176_curated_17
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26343..29294
DNA (2952bp) protein (984aa)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WGU4_DESOD rbh
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase {ECO:0000313|EMBL:AET68530.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
phosphoenolpyruvate synthase rbh
S23_scaffold_176_curated_18
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29380..30321
DNA (942bp) protein (314aa)
Transcriptional regulator, MarR family with acetyltransferase activity n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4S1_9CHLR rbh
MarR family transcriptional regulator {ECO:0000313|EMBL:KJS47675.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
MarR family transcriptional regulator
S23_scaffold_176_curated_19
unknown

Not on your lists

30442..30675
DNA (234bp) protein (78aa)

This feature has no annotations

S23_scaffold_176_curated_20
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30737..32200
DNA (1464bp) protein (488aa)
UPF0061 protein Dtox_2160 n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZ74_DESAS rbh
hypothetical protein rbh
UPF0061 protein Dtox_2160 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
S23_scaffold_176_curated_21
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32345..32689
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0Z665_BREBN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAH42022.1}; TaxID=358681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599).;"
S23_scaffold_176_curated_22
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32675..33619)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00031D87B2 rbh
4Fe-4S ferredoxin {ECO:0000313|EMBL:KJS23094.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
4Fe-4S ferredoxin rbh
S23_scaffold_176_curated_23
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34167..35024
DNA (858bp) protein (286aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS46182.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
Phenylacetic acid-responsive transcriptional repressor id=3617888 bin=GWF2_Clostridiales_36_10 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
phenylacetic acid-responsive transcriptional repressor
S23_scaffold_176_curated_24
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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35031..35780
DNA (750bp) protein (250aa)
Abortive infection protein id=3617892 bin=GWF2_Clostridiales_36_10 species=Arthrobacter sp. genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
abortive infection protein
Tax=GWF2_Clostridiales_36_10_curated
S23_scaffold_176_curated_25
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36028..36723
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Paenibacillus alvei TS-15 RepID=S9STI8_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:KJR45230.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein
S23_scaffold_176_curated_26
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36975..37547
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MWG7_9CLOT
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGF55802.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
S23_scaffold_176_curated_27
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37606..38796
DNA (1191bp) protein (397aa)
radical SAM protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI000310ACA4 rbh
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:AHF09310.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
S23_scaffold_176_curated_28
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38816..39223
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Dehalobacter RepID=K4KW15_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV06428.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
S23_scaffold_176_curated_29
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39226..39765
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031D3B0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF09312.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
S23_scaffold_176_curated_30
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39762..41045
DNA (1284bp) protein (428aa)
choline dehydrogenase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002F5A2BE rbh
choline dehydrogenase
Choline dehydrogenase {ECO:0000313|EMBL:AHF09313.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
Displaying items 1-30 of 45 in total

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