ggKbase home page

S23_scaffold_746_curated

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_746_curated_trna_1
unknown

Not on your lists

comp(1..79)
DNA (79bp)
transferRNA Pseudo
S23_scaffold_746_curated_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(260..1195)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSY8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHE95560.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
rdlA; Rhodanese
S23_scaffold_746_curated_2
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1210..2130)
DNA (921bp) protein (307aa)
Putative thiosulfate sulfurtransferase {ECO:0000313|EMBL:KJJ74640.1}; EC=2.8.1.1 {ECO:0000313|EMBL:KJJ74640.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSY9_9CLOT rbh
rhodanese
S23_scaffold_746_curated_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2308..3888
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CQ53_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOD00811.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase rbh
S23_scaffold_746_curated_4
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3838..4461)
DNA (624bp) protein (208aa)
ABC transporter related protein n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DND5_HALPG
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADO77554.1}; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL).;"
S23_scaffold_746_curated_5
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4691..5479)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSZ2_9CLOT
Bicarbonate transport system permease protein CmpB {ECO:0000313|EMBL:KJJ74637.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
nitrate/sulfonate/bicarbonate ABC transporter permease
S23_scaffold_746_curated_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5466..6488)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XBL2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY93268.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
S23_scaffold_746_curated_7
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6485..7714)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSZ4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHE95566.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein rbh
S23_scaffold_746_curated_8
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7714..8451)
DNA (738bp) protein (246aa)
Glycosyl transferase n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0FAY2_DESDL
glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:AGA70382.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
S23_scaffold_746_curated_9
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8448..9590)
DNA (1143bp) protein (381aa)
4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DXH7_9FIRM rbh
4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase {ECO:0000313|EMBL:CCU78074.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
TDP-4-keto-6-deoxy-D-glucose transaminase rbh
S23_scaffold_746_curated_10
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9715..10707
DNA (993bp) protein (331aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46) rbh
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUH0_CLOCD rbh
S23_scaffold_746_curated_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10700..10930
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XCA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93271.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
response regulator SirA
S23_scaffold_746_curated_12
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10943..11839)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSZ7_9CLOT
HTH-type transcriptional regulator CynR {ECO:0000313|EMBL:KJJ74632.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
putative Transcriptional regulator
S23_scaffold_746_curated_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12014..12694
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XBL5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY93273.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
conserved membrane protein of unknown function rbh
S23_scaffold_746_curated_14
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12714..12941
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSZ9_9CLOT
SirA family protein
Response regulator SirA {ECO:0000313|EMBL:KEZ86496.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
S23_scaffold_746_curated_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12989..13537
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VRH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93275.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
conserved membrane protein of unknown function
S23_scaffold_746_curated_16
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13687..14907
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HT01_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHE95573.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
S23_scaffold_746_curated_17
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

15162..15734
DNA (573bp) protein (191aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Xanthine phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PN92_9FIRM
xanthine phosphoribosyltransferase
S23_scaffold_746_curated_18
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15953..17056
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=2 Tax=unclassified Eubacteriaceae RepID=G9X309_9FIRM rbh
hypothetical protein rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_746_curated_19
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17471..18577
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HVF3_9FIRM rbh
ABC transporter ATPase rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_746_curated_20
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18571..19644
DNA (1074bp) protein (358aa)
Uncharacterized protein n=2 Tax=unclassified Eubacteriaceae RepID=V9HR82_9FIRM rbh
rbsC; branched chain amino acid ABC transporter permease rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_746_curated_21
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19645..20571
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DD03F8 rbh
putative ABC-type transport system, permease component rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_746_curated_22
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20641..21138)
DNA (498bp) protein (166aa)
Molybdenum cofactor synthesis domain-containing protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WJU8_9CLOT
Molybdenum cofactor synthesis domain-containing protein {ECO:0000313|EMBL:ENZ03401.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
molybdenum cofactor synthesis domain-containing protein
S23_scaffold_746_curated_23
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21263..21922
DNA (660bp) protein (220aa)
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_746_curated_24
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21952..22491
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DP49_9FIRM
DJ-1 family protein
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_746_curated_25
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

22488..23375
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F2Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03694.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
phosphotransferase domain-containing protein
Displaying 26 items

View Taxonomy