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S23_scaffold_387_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_387_curated_1
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..2187)
DNA (2187bp) protein (729aa)
Chemotaxis methyl-accepting receptor n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LD81_ACEWD
chemotaxis methyl-accepting receptor
Chemotaxis methyl-accepting receptor {ECO:0000313|EMBL:AFA49126.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
S23_scaffold_387_curated_2
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2277..2879)
DNA (603bp) protein (201aa)
chemotaxis protein CheR n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D0FE
MCP methyltransferase, CheR-type
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:AFV23131.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
S23_scaffold_387_curated_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(3049..3951)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJ03_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDB02002.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
epimerase
S23_scaffold_387_curated_4
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4068..4697)
DNA (630bp) protein (210aa)
Periplasmic immunogenic protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q893K4_CLOTE
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
S23_scaffold_387_curated_5
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4941..6752)
DNA (1812bp) protein (604aa)
hydrolase n=1 Tax=Brevibacillus brevis RepID=UPI00037F97AB
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EJL30151.1}; Flags: Precursor;; TaxID=1144308 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
amidohydrolase family
S23_scaffold_387_curated_6
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6793..8499)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZMU6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ15060.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
amino acid transporter protein rbh
S23_scaffold_387_curated_7
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8514..9848)
DNA (1335bp) protein (445aa)
Saccharopine dehydrogenase {ECO:0000313|EMBL:EEA85964.1}; EC=1.5.1.7 {ECO:0000313|EMBL:EEA85964.1};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
Saccharopine dehydrogenase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWQ3_9FIRM rbh
saccharopine dehydrogenase-like protein
S23_scaffold_387_curated_8
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10364..11122)
DNA (759bp) protein (253aa)
Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TKW2_ALKMQ
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABR46830.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
S23_scaffold_387_curated_9
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11115..12878)
DNA (1764bp) protein (588aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0ATI9_CLOA9
PAS/PAC sensor signal transduction histidine kinase
S23_scaffold_387_curated_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(13114..14622)
DNA (1509bp) protein (503aa)
Sporulation stage IV protein A n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1K2_9FIRM rbh
Sporulation stage IV protein A {ECO:0000313|EMBL:CDB02906.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
stage IV sporulation protein A rbh
S23_scaffold_387_curated_11
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(14676..16001)
DNA (1326bp) protein (442aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-) rbh
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DUW9_9FIRM rbh
S23_scaffold_387_curated_12
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16171..17409
DNA (1239bp) protein (413aa)
Threonine dehydratase n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5S1Y5_9CLOT rbh
threonine dehydratase rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_387_curated_13
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17459..18472)
DNA (1014bp) protein (338aa)
glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (EC:1.1.1.94) rbh
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLF5_9FIRM rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_387_curated_14
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18469..19071)
DNA (603bp) protein (201aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQN9_9FIRM
acyl-phosphate glycerol-3-phosphate acyltransferase
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_387_curated_15
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(19064..20389)
DNA (1326bp) protein (442aa)
GTPase Der n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DXE6_9FIRM rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
engA; GTP-binding protein EngA rbh
S23_scaffold_387_curated_16
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(20400..21293)
DNA (894bp) protein (298aa)
Signal recognition particle receptor FtsY n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E4V0_9FIRM rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
ftsY; signal recognition particle-docking protein FtsY rbh
S23_scaffold_387_curated_17
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21547..25095)
DNA (3549bp) protein (1183aa)
Chromosome partition protein Smc n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DUW5_9FIRM rbh
smc; chromosome segregation protein Smc rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_387_curated_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(25085..25783)
DNA (699bp) protein (233aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rnc; Ribonuclease 3 (Ribonuclease III) (RNase III) (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLI1_9FIRM
S23_scaffold_387_curated_19
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25776..26792)
DNA (1017bp) protein (339aa)
Phosphate acyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQP4_9FIRM rbh
putative glycerol-3-phosphate acyltransferase PlsX rbh
Tax=BJP_IG2103_Clostridiales_50_15
S23_scaffold_387_curated_20
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(26955..27581)
DNA (627bp) protein (209aa)
Single-strand binding protein/Primosomal replication protein n n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLL5_9FIRM
Single-strand binding protein/Primosomal replication protein n {ECO:0000313|EMBL:CDB02947.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
single-strand binding protein/Primosomal replication protein n
S23_scaffold_387_curated_21
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27818..28750)
DNA (933bp) protein (311aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
Cysteine synthase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R3Y1_9CLOT rbh
cysteine synthase A rbh
S23_scaffold_387_curated_22
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29074..29832)
DNA (759bp) protein (253aa)
Polysaccharide deacetylase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNM6_ALKMQ rbh
Deacetylase {ECO:0000313|EMBL:KGG79874.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
polysaccharide deacetylase rbh
S23_scaffold_387_curated_23
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30160..30711
DNA (552bp) protein (184aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBG1_9CLOT rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EGD48365.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
metal dependent phophohydrolase
S23_scaffold_387_curated_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30886..31695)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000380CC92 rbh
TIGR00268 family protein {ECO:0000313|EMBL:EJF40963.1}; Flags: Fragment;; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein rbh
S23_scaffold_387_curated_25
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31728..32264)
DNA (537bp) protein (179aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Clostridium sp. BNL1100 RepID=H2J9D8_9CLOT
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:AEY67955.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
S23_scaffold_387_curated_26
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32261..33004)
DNA (744bp) protein (248aa)
DNA/pantothenate metabolism flavoprotein domain protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I0F1_CLOCE
phosphopantothenate--cysteine ligase
DNA/pantothenate metabolism flavoprotein domain protein {ECO:0000313|EMBL:ACL77477.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
S23_scaffold_387_curated_27
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33001..33396)
DNA (396bp) protein (132aa)
Transcription regulator [contains diacylglycerol kinase catalytic domain protein] n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0I900_9FIRM
Transcription regulator
Tax=BJP_IG2103_Clostridiales_50_15
Displaying 27 items

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