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S23_scaffold_378_curated

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_378_curated_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..319
DNA (318bp) protein (106aa)
Transposase, IS4 family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVF9_9BURK
Transposase, IS4 family protein {ECO:0000313|EMBL:EHL23645.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
transposase, IS4 family protein
S23_scaffold_378_curated_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

545..1384
DNA (840bp) protein (280aa)
signal transduction protein id=12551825 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
signal transduction protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1394..2590
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWA3_9BURK rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_4
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2591..3727)
DNA (1137bp) protein (379aa)
Alcohol dehydrogenase, class IV n=1 Tax=Acidovorax sp. CF316 RepID=J1EMV8_9BURK rbh
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EJE53489.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
iron-containing alcohol dehydrogenase rbh
S23_scaffold_378_curated_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3808..4677
DNA (870bp) protein (290aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4L0_ACIDE rbh
hydratase/decarboxylase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4700..5662
DNA (963bp) protein (321aa)
alpha/beta hydrolase n=1 Tax=Acidovorax radicis RepID=UPI0002375C68 rbh
alpha/beta hydrolase domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5728..6540
DNA (813bp) protein (271aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3M6_9BURK rbh
N-acetyltransferase GCN5 rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6526..7689)
DNA (1164bp) protein (388aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Acidovorax sp. CF316 RepID=J1EBY3_9BURK rbh
aminotransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_9

Not on your lists

comp(7838..8779)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DLF2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD98051.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
CysB family transcriptional regulator-like protein rbh
S23_scaffold_378_curated_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8819..9208)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KFB2_9BURK
cobalamin (vitamin B12) biosynthesis CbiX protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9220..10326)
DNA (1107bp) protein (369aa)
Permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAK4_9BURK rbh
permease rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10323..11417)
DNA (1095bp) protein (365aa)
permease n=1 Tax=Acidovorax radicis RepID=UPI000237512F rbh
permease rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11441..12937
DNA (1497bp) protein (499aa)
Probable cytosol aminopeptidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4Z4_9BURK rbh
leucyl aminopeptidase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_14
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12944..13378
DNA (435bp) protein (145aa)
DNA polymerase III chi subunit HolC n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9U1_ACIAP
DNA polymerase III chi subunit HolC
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_15
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13378..14010
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00035CECC5
Uncharacterized protein {ECO:0000313|EMBL:KJA12406.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
S23_scaffold_378_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14141..15271
DNA (1131bp) protein (377aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAK3_9BURK rbh
extracellular ligand-binding receptor rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFU46241.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_378_curated_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15344..16351)
DNA (1008bp) protein (336aa)
D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW36_9BURK rbh
D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EHL23415.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
D-isomer specific 2-hydroxyacid dehydrogenase rbh
S23_scaffold_378_curated_18
unknown

Not on your lists

comp(16446..16850)
DNA (405bp) protein (135aa)

This feature has no annotations

S23_scaffold_378_curated_19
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16975..17649)
DNA (675bp) protein (225aa)
LexA repressor (EC:3.4.21.88) rbh
LexA repressor n=1 Tax=Acidovorax sp. CF316 RepID=J1ECC2_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_20
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17732..18700
DNA (969bp) protein (323aa)
Asparaginase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAJ9_9BURK rbh
asparaginase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18789..19445)
DNA (657bp) protein (219aa)
adenylate kinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003697A05 rbh
adenylate kinase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19605..20405)
DNA (801bp) protein (267aa)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0L9_9BURK rbh
3-deoxy-manno-octulosonate cytidylyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20402..20584)
DNA (183bp) protein (61aa)
UPF0434 protein Alide_2628 n=2 Tax=Alicycliphilus denitrificans RepID=E8TSM4_ALIDB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_24
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20610..21653)
DNA (1044bp) protein (348aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130) rbh
Tetraacyldisaccharide 4'-kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1M4_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21672..22106)
DNA (435bp) protein (145aa)
biopolymer transporter ExbD n=1 Tax=Acidovorax radicis RepID=UPI000237513C
biopolymer transport protein ExbD/TolR
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22126..22758)
DNA (633bp) protein (211aa)
Mota/tolq/exbb proton channel n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0L5_9BURK rbh
MotA/TolQ/ExbB proton channel rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_27
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23110..24435
DNA (1326bp) protein (442aa)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZF1_9BURK rbh
exodeoxyribonuclease VII large subunit rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24573..25154
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Superoxide dismutase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAJ4_9BURK rbh
superoxide dismutase rbh
S23_scaffold_378_curated_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25444..27681
DNA (2238bp) protein (746aa)
isocitrate dehydrogenase (EC:1.1.1.42) rbh
isocitrate dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002377FC2 rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_378_curated_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27816..28286)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1M2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46225.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 1-30 of 44 in total

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