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S23_scaffold_103_curated

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_103_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2909)
DNA (2907bp) protein (969aa)
excinuclease ABC subunit A id=12550668 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
excinuclease ABC subunit A rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_103_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3101..4288
DNA (1188bp) protein (396aa)
major facilitator superfamily transporter id=12550079 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
major facilitator superfamily transporter rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_103_curated_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4428..4991
DNA (564bp) protein (188aa)
single-stranded DNA-binding protein n=1 Tax=Acidovorax radicis RepID=UPI00023766B3 rbh
ssDNA-binding protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S23_scaffold_103_curated_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5246..6364)
DNA (1119bp) protein (373aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-) rbh
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSB8_9BURK rbh
S23_scaffold_103_curated_5

Not on your lists

comp(6515..7684)
DNA (1170bp) protein (390aa)
Transposase IS4 family protein n=1 Tax=mine drainage metagenome RepID=T0Y1B6_9ZZZZ rbh
Transposase IS4 family protein {ECO:0000313|EMBL:EQD26793.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IS4 family transposase rbh
S23_scaffold_103_curated_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7946..11125
DNA (3180bp) protein (1060aa)
Type III restriction protein res subunit n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSB9_9BURK rbh
Type III restriction protein res subunit {ECO:0000313|EMBL:EHL24761.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
type III restriction protein res subunit rbh
S23_scaffold_103_curated_7
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11228..11713)
DNA (486bp) protein (162aa)
Nudix hydrolase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSC1_9BURK rbh
Nudix hydrolase {ECO:0000313|EMBL:EHL24763.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
nudix hydrolase rbh
S23_scaffold_103_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11783..12394
DNA (612bp) protein (204aa)
Lysine exporter protein (LYSE/YGGA) n=2 Tax=Alicycliphilus denitrificans RepID=E8TYL6_ALIDB rbh
lysine exporter protein (lyse/ygga) rbh
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:AEB86956.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
S23_scaffold_103_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12395..12898)
DNA (504bp) protein (168aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSC2_9BURK
GCN5-like N-acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_103_curated_10
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12999..13931
DNA (933bp) protein (311aa)
esterase/lipase (EC:3.1.1.-)
Esterase/lipase {ECO:0000313|EMBL:CAJ96039.1}; EC=3.1.1.- {ECO:0000313|EMBL:CAJ96039.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036D4AF1
S23_scaffold_103_curated_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13981..15375)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD61_ACISJ rbh
integral membrane sensor signal transduction histidine kinase rbh
S23_scaffold_103_curated_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15372..16043)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIC0_ACIET rbh
winged helix family two component transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACM34858.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
S23_scaffold_103_curated_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16024..16395)
DNA (372bp) protein (124aa)
Membrane protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD63_ACISJ
membrane protein
Membrane protein {ECO:0000313|EMBL:ABM44188.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
S23_scaffold_103_curated_14
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17270..18655
DNA (1386bp) protein (462aa)
Ferric reductase domain protein transmembrane component n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIC2_ACIET rbh
ferric reductase rbh
Ferric reductase domain protein transmembrane component {ECO:0000313|EMBL:ACM34860.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
S23_scaffold_103_curated_15
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18678..19085
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F858D
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22164.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
S23_scaffold_103_curated_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19106..19582
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZM4_9BURK
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S23_scaffold_103_curated_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19594..21225
DNA (1632bp) protein (544aa)
oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F1270 rbh
oxidoreductase FAD/NAD(P)-binding domain-containing protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S23_scaffold_103_curated_18
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21265..21786
DNA (522bp) protein (174aa)
oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F1270
Oxidoreductase FAD/NAD(P)-binding domain-containing protein {ECO:0000313|EMBL:EHL22162.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
flavodoxin/nitric oxide synthase
S23_scaffold_103_curated_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21830..22744
DNA (915bp) protein (305aa)
thiamine biosynthesis lipoprotein ApbE n=1 Tax=Thiobacillus thioparus RepID=UPI00036DFBF6 rbh
ApbE family lipoprotein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S23_scaffold_103_curated_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22948..23265
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYM7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV02036.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
S23_scaffold_103_curated_21
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23394..24392)
DNA (999bp) protein (333aa)
Putative dehydrogenase, NAD(P)-binding domain and GroES-like domain n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMZ0_AZOBR rbh
Quinone oxidoreductase, YhdH/YhfP family
Quinone oxidoreductase, YhdH/YhfP family {ECO:0000313|EMBL:CDN55652.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
S23_scaffold_103_curated_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24472..25044)
DNA (573bp) protein (191aa)
hypothetical protein id=12550492 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_103_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25117..25368
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYY8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48408.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_103_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25399..27078)
DNA (1680bp) protein (560aa)
fumarate reductase n=1 Tax=Acidovorax radicis RepID=UPI0002376A3B rbh
twin-arginine translocation pathway signal protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_103_curated_25
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27102..28829)
DNA (1728bp) protein (576aa)
spermidine synthase (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16] id=12550495 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
spermidine synthase (EC:2.5.1.16) rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
S23_scaffold_103_curated_26
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28826..29089)
DNA (264bp) protein (88aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD74_ACISJ
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:ABM44199.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
S23_scaffold_103_curated_27
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29198..30184
DNA (987bp) protein (329aa)
Meso-diaminopimelate d-dehydrogenase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XY12_9RHOO rbh
Meso-diaminopimelate d-dehydrogenase {ECO:0000313|EMBL:KHL70117.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
Meso-diaminopimelate d-dehydrogenase rbh
S23_scaffold_103_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30439..30660)
DNA (222bp) protein (74aa)
hypothetical protein id=12550496 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_103_curated_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30681..32171)
DNA (1491bp) protein (497aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002376A3E rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_103_curated_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32276..33334)
DNA (1059bp) protein (353aa)
hypothetical protein id=12550500 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 1-30 of 82 in total

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