ggKbase home page

S23_scaffold_924_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_924_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..520)
DNA (519bp) protein (173aa)
Transposase for insertion sequence element IS1071 n=1 Tax=Comamonas sp. KV36 RepID=I1Z138_9BURK rbh
transposase, Tn3 family protein 1 rbh
TnpA11 {ECO:0000313|EMBL:AEX00431.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
S23_scaffold_924_curated_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

616..984
DNA (369bp) protein (123aa)
Phage integrase family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W738_ACISJ
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ABM42063.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
S23_scaffold_924_curated_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(997..1326)
DNA (330bp) protein (110aa)
Transcriptional regulator, XRE family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W739_ACISJ
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABM42064.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
S23_scaffold_924_curated_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1323..1706)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W740_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42065.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
S23_scaffold_924_curated_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1783..2376
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F0B05E
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDR88101.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
ABC transporter binding protein
S23_scaffold_924_curated_6
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2481..3995
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00035FA0A3 rbh
aldehyde dehydrogenase rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
S23_scaffold_924_curated_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4043..5098
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E4E830 rbh
Alcohol dehydrogenase Zn-binding {ECO:0000313|EMBL:GAN77781.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
zinc-containing alcohol dehydrogenase superfamily protein
S23_scaffold_924_curated_8
unknown

Not on your lists

5098..5304
DNA (207bp) protein (69aa)

This feature has no annotations

S23_scaffold_924_curated_9
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5199..6056)
DNA (858bp) protein (286aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19) rbh
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003750188 rbh
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
S23_scaffold_924_curated_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6419..6880
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003635C67
hemerythrin
Hemerythrin {ECO:0000313|EMBL:AIJ48462.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
S23_scaffold_924_curated_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6925..8244
DNA (1320bp) protein (440aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQT1_COMTE rbh
MarR family transcriptional regulator
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:EED67076.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
S23_scaffold_924_curated_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8276..9238
DNA (963bp) protein (321aa)
4,5-dihydroxyphthalate decarboxylase n=1 Tax=Chryseobacterium taeanense RepID=UPI0003730372 rbh
4,5-dihydroxyphthalate decarboxylase
4,5-dihydroxyphthalate decarboxylase {ECO:0000313|EMBL:AIJ48460.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
S23_scaffold_924_curated_13
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9271..10248
DNA (978bp) protein (326aa)
4,5-dihydroxyphthalate dehydrogenase n=1 Tax=Chryseobacterium taeanense RepID=UPI00031F83E7 rbh
Uncharacterized protein {ECO:0000313|EMBL:EED67078.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
TctC
S23_scaffold_924_curated_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10258..11235
DNA (978bp) protein (326aa)
phthalate 4,5-dioxygenase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F0FC30 rbh
phthalate 4,5-dioxygenase
Ferredoxin {ECO:0000313|EMBL:EED67079.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
S23_scaffold_924_curated_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11292..12410
DNA (1119bp) protein (373aa)
4,5-dihydroxyphthalate dehydrogenase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FB9B6E rbh
4,5-dihydroxyphthalate dehydrogenase
4,5-dihydroxyphthalate dehydrogenase {ECO:0000313|EMBL:AIJ48457.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
S23_scaffold_924_curated_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12596..13516
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003796841 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ48456.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
S23_scaffold_924_curated_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13696..14670
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00037A0469 rbh
Extra-cytoplasmic solute receptor protein {ECO:0000313|EMBL:GAO20788.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
bug; ABC transporter substrate-binding protein rbh
S23_scaffold_924_curated_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14680..15849
DNA (1170bp) protein (390aa)
hypothetical protein, partial n=1 Tax=Chryseobacterium taeanense RepID=UPI0003626012 rbh
L-lactate dehydrogenase {ECO:0000313|EMBL:GAO20789.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
S-mandelate dehydrogenase (MdlB)
S23_scaffold_924_curated_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16525..17028
DNA (504bp) protein (168aa)
MarR family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI00030350A7 rbh
MarR family transcriptional regulator {ECO:0000313|EMBL:GAO20790.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
MarR family transcriptional regulator
S23_scaffold_924_curated_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17405..18688
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00030E31FB rbh
Citrate synthase {ECO:0000313|EMBL:GAO20791.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
S23_scaffold_924_curated_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18851..19015
DNA (165bp) protein (55aa)
Para-aminobenzoate synthase, component I {ECO:0000313|EMBL:GAO20792.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
S23_scaffold_924_curated_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19032..20081)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00037D82C3 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO20793.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
S23_scaffold_924_curated_23
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20657..21640)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D3BA88 rbh
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:GAO20794.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
aldehyde dehydrogenase
Displaying 23 items

View Taxonomy