ggKbase home page

S23_scaffold_373_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_373_curated_1
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335..1756)
DNA (1422bp) protein (474aa)
cell division protein Fic n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI000380983D rbh
cell division protein Fic
Cell division protein Fic {ECO:0000313|EMBL:AJE16598.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
S23_scaffold_373_curated_2
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1874..2203
DNA (330bp) protein (110aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TW23_ACIAC
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ABM35161.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
S23_scaffold_373_curated_3
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2220..3350
DNA (1131bp) protein (377aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSE8_9BURK rbh
Cell division protein Fic {ECO:0000313|EMBL:KJA09539.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
filamentation induced by cAMP protein fic rbh
S23_scaffold_373_curated_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3393..3959
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6N6_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EER59868.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
S23_scaffold_373_curated_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4085..4876)
DNA (792bp) protein (264aa)
FRG domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV98_9GAMM
FRG domain protein {ECO:0000313|EMBL:EIJ35291.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
FRG domain-containing protein
S23_scaffold_373_curated_6
Tolumonas auensis, Tolumonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4857..5699)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LEA6_TOLAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ92927.1}; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis (strain DSM 9187 / TA4).;"
S23_scaffold_373_curated_7

Not on your lists

comp(5780..5986)
DNA (207bp) protein (69aa)
NERD protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CUZ7_9BACT
NERD protein {ECO:0000313|EMBL:EKD96895.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S23_scaffold_373_curated_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5986..6462)
DNA (477bp) protein (159aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
NERD domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6N3_ACIDE
hypothetical protein
S23_scaffold_373_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6630..8117
DNA (1488bp) protein (496aa)
Major facilitator transporter n=2 Tax=Bacteria RepID=H0BSF0_9BURK rbh
transporter rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8206..8613)
DNA (408bp) protein (136aa)
3-demethylubiquinone-9 3-methyltransferase; K04750 PhnB protein id=12551390 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
3-demethylubiquinone-9 3-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_11
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8698..9471)
DNA (774bp) protein (258aa)
protein tyrosine phosphatase n=1 Tax=Acidovorax radicis RepID=UPI0002375C35 rbh
protein tyrosine/serine phosphatase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S23_scaffold_373_curated_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9594..9935)
DNA (342bp) protein (114aa)
hypothetical protein id=12551387 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
S23_scaffold_373_curated_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9946..12894)
DNA (2949bp) protein (983aa)
DNA topoisomerase III n=1 Tax=Acidovorax radicis RepID=UPI0002375C3C rbh
DNA topoisomerase III rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_373_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13016..13555
DNA (540bp) protein (180aa)
nuclear protein SET; K07117 id=12551385 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
nuclear protein SET rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13552..14400
DNA (849bp) protein (283aa)
biotin--acetyl-CoA-carboxylase ligase id=12551384 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
biotin--acetyl-CoA-carboxylase ligase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14419..15129
DNA (711bp) protein (237aa)
Sporulation domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHR1_ACIET
sporulation domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15152..16606)
DNA (1455bp) protein (485aa)
Histidine kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9K3_ACIDE rbh
integral membrane sensor signal transduction histidine kinase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16849..17523)
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family id=1283750 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
winged helix family two component transcriptional regulator rbh
Tax=GWE1_Burkholderiales_65_30_curated
S23_scaffold_373_curated_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17580..18077)
DNA (498bp) protein (166aa)
regulatory protein MarR id=12550725 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
regulatory protein marr
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18220..19362
DNA (1143bp) protein (381aa)
recombination protein RecA; K03553 recombination protein RecA id=12550724 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
recombination protein RecA rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19612..20067
DNA (456bp) protein (152aa)
recX; RecX family regulatory protein; K03565 regulatory protein id=12550723 bin=BDI species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
regulatory protein RecX
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20169..21101)
DNA (933bp) protein (311aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] id=12550722 bin=BDI species=Chryseobacterium taeanense genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BDI organism_group=Betaproteobacteria rbh
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21356..22516
DNA (1161bp) protein (387aa)
succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] id=12550721 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
succinyl-CoA synthetase subunit beta (EC:6.2.1.5) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22546..23442
DNA (897bp) protein (299aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] id=12550720 bin=BDI species=Limnohabitans sp. Rim47 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23652..26306
DNA (2655bp) protein (885aa)
Serine/threonine protein kinase, bacterial n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUQ4_9BURK rbh
serine/threonine protein kinase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26303..27106
DNA (804bp) protein (268aa)
protein serine/threonine phosphatase id=12550716 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
protein serine/threonine phosphatase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27153..27803
DNA (651bp) protein (217aa)
FHA domain-containing protein id=12550715 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
FHA domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27834..30110
DNA (2277bp) protein (759aa)
Putative transmembrane sensor domain protein n=1 Tax=Acidovorax sp. CF316 RepID=J1E9G9_9BURK rbh
adenylate/guanylate cyclase with chase sensor rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30228..31019
DNA (792bp) protein (264aa)
Metal-dependent hydrolase, beta-lactamase superfamily III n=1 Tax=Acidovorax sp. CF316 RepID=J0TYT1_9BURK rbh
3',5'-cyclic-nucleotide phosphodiesterase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_373_curated_30
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31179..32117
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000382876D rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD24127.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein rbh
Displaying items 1-30 of 34 in total

View Taxonomy