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S23_scaffold_241_curated

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_241_curated_1
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175..546)
DNA (372bp) protein (124aa)
GCN5 family N-acetyltransferase n=1 Tax=Nevskia ramosa RepID=UPI0003B6DE36
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGC48968.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
S23_scaffold_241_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1423..2487
DNA (1065bp) protein (355aa)
Integron integrase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJI9_THIDA rbh
integron integrase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2612..2998)
DNA (387bp) protein (129aa)
heat shock protein Hsp20 id=12549727 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
heat shock protein Hsp20
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3094..4425
DNA (1332bp) protein (444aa)
transporter signal peptide protein id=12549728 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
transporter signal peptide protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4487..5083
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036CD108
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU37309.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
S23_scaffold_241_curated_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5070..6452
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XBA3_VARPD rbh
MATE efflux family protein rbh
MATE efflux family protein {ECO:0000313|EMBL:AGU49766.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
S23_scaffold_241_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6468..7238)
DNA (771bp) protein (257aa)
ABC transporter n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1A7_9BURK rbh
ABC transporter permease rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_241_curated_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7235..8203)
DNA (969bp) protein (323aa)
Polyamine-transporting ATPase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7F6_9BURK rbh
polyamine-transporting ATPase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S23_scaffold_241_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8399..9286)
DNA (888bp) protein (296aa)
putative esterase id=12549729 bin=BDI species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
putative esterase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9546..10376)
DNA (831bp) protein (277aa)
hypothetical protein id=12549730 bin=BDI species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10422..11972)
DNA (1551bp) protein (517aa)
Acyltransferase, WS/DGAT/MGAT n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNB2_9BURK rbh
acyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12060..12557)
DNA (498bp) protein (166aa)
hypothetical protein id=5082250 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S23_scaffold_241_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12571..13650)
DNA (1080bp) protein (360aa)
lytic murein transglycosylase b id=12549735 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
lytic murein transglycosylase b rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13647..15692)
DNA (2046bp) protein (682aa)
transglutaminase domain-containing protein id=12549736 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
transglutaminase domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15775..16785)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023754C4 rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16818..17738)
DNA (921bp) protein (307aa)
ATPase id=12549739 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ATPase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17781..18734
DNA (954bp) protein (318aa)
histone deacetylase superfamily protein id=12549740 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
histone deacetylase superfamily protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18877..19668
DNA (792bp) protein (264aa)
enoyl-CoA hydratase/isomerase id=12549741 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
enoyl-CoA hydratase/isomerase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_19
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19668..20993
DNA (1326bp) protein (442aa)
MscS Mechanosensitive ion channel n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6G6_ACIDE rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EER59938.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
mechanosensitive ion channel protein MscS rbh
S23_scaffold_241_curated_20
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21161..21910
DNA (750bp) protein (250aa)
electron transfer flavoprotein subunit alpha/beta; K03521 electron transfer flavoprotein beta subunit id=12550931 bin=BDI species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
electron transfer flavoprotein subunit alpha/beta rbh
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:AEF91245.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S23_scaffold_241_curated_21
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21923..22855
DNA (933bp) protein (311aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2Y1_ACIDE rbh
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:EER61192.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
electron transfer flavoprotein subunit alpha rbh
S23_scaffold_241_curated_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22928..24718
DNA (1791bp) protein (597aa)
acyl-CoA dehydrogenase-like protein id=12552471 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
acyl-CoA dehydrogenase-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24809..25765
DNA (957bp) protein (319aa)
2-nitropropane dioxygenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW84_9BURK rbh
2-nitropropane dioxygenase rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:AFU47148.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_241_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25894..27891
DNA (1998bp) protein (666aa)
acetyl-CoA synthetase n=1 Tax=Acidovorax radicis RepID=UPI0002376D34 rbh
acetate--CoA ligase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28206..28511)
DNA (306bp) protein (102aa)
Cytochrome c class I n=2 Tax=Alicycliphilus denitrificans RepID=E8U0L2_ALIDB
cytochrome c class i
Cytochrome c-551 {ECO:0000313|EMBL:GAO21211.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
S23_scaffold_241_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28611..28853
DNA (243bp) protein (81aa)
hypothetical protein id=12552929 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29145..31004
DNA (1860bp) protein (620aa)
dihydroxy-acid dehydratase (EC:4.2.1.9) rbh
Dihydroxy-acid dehydratase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0I9_ACIDE rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_241_curated_28
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31150..31626)
DNA (477bp) protein (159aa)
Bacterioferritin n=1 Tax=Acidovorax sp. CF316 RepID=J1EJ60_9BURK
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
bacterioferritin
S23_scaffold_241_curated_29
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31686..32501
DNA (816bp) protein (272aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-) rbh
prolipoprotein diacylglyceryl transferase n=1 Tax=Acidovorax radicis RepID=UPI0002376D42 rbh
S23_scaffold_241_curated_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32498..34366)
DNA (1869bp) protein (623aa)
Putative fatty-acid--CoA ligase n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UET6_9RHOB rbh
AMP-dependent synthetase and ligase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 1-30 of 44 in total

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