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S23_scaffold_554_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_554_curated_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1271)
DNA (1269bp) protein (423aa)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14) rbh
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002375B8E rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1379..2305
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8V9_ALIDK rbh
LysR family transcriptional regulator rbh
LysR substrate-binding protein {ECO:0000313|EMBL:ADU99641.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
S23_scaffold_554_curated_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2426..2671
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GXP4_METFK
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S23_scaffold_554_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2783..4402)
DNA (1620bp) protein (540aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Acidovorax sp. CF316 RepID=J0U6I8_9BURK rbh
EmrB/QacA subfamily drug resistance transporter rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4415..5710)
DNA (1296bp) protein (432aa)
hemolysin D n=1 Tax=Acidovorax radicis RepID=UPI0002375B94 rbh
secretion protein HlyD family protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5765..7231)
DNA (1467bp) protein (489aa)
RND transporter n=1 Tax=Acidovorax radicis RepID=UPI0002375B93 rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJE51709.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
RND efflux system outer membrane lipoprotein rbh
S23_scaffold_554_curated_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7252..7752)
DNA (501bp) protein (167aa)
Transcriptional regulator, MarR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T446_ACIDE
marR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S23_scaffold_554_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7990..8457)
DNA (468bp) protein (156aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002375B7C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_9
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8513..9874)
DNA (1362bp) protein (454aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EQL0_9BURK rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJE54471.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
PAS and GAF sensor-containing diguanylate cyclase rbh
S23_scaffold_554_curated_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10097..10960)
DNA (864bp) protein (288aa)
methylisocitrate lyase (EC:4.1.3.30) rbh
carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Acidovorax radicis RepID=UPI0002375828 rbh
2,3-dimethylmalate lyase {ECO:0000313|EMBL:GAD21302.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
S23_scaffold_554_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11155..13131
DNA (1977bp) protein (659aa)
Propionate catabolism operon regulatory protein PrpR n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WU29_DELAC rbh
Propionate catabolism operon regulatory protein PrpR {ECO:0000313|EMBL:EPD43313.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Fis family proprionate catabolism activator rbh
S23_scaffold_554_curated_12
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13297..13974
DNA (678bp) protein (226aa)
Nitroreductase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXI5_HYPNA rbh
nitroreductase family protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
S23_scaffold_554_curated_13
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14748..16151
DNA (1404bp) protein (468aa)
Mobile element protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HBB1_BURVI rbh
Mobile element protein {ECO:0000313|EMBL:ERJ37714.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
transposase IS116/IS110/IS902 family protein rbh
S23_scaffold_554_curated_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16365..17384)
DNA (1020bp) protein (340aa)
Transposase IS116/IS110/IS902 family protein id=1278643 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
transposase IS116/IS110/IS902 family protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S23_scaffold_554_curated_15
unknown

Not on your lists

17876..18160
DNA (285bp) protein (95aa)

This feature has no annotations

S23_scaffold_554_curated_16
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18157..20523
DNA (2367bp) protein (789aa)
hypothetical protein n=1 Tax=Prochlorothrix hollandica RepID=UPI0003477D79 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIF32034.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein rbh
S23_scaffold_554_curated_17
unknown

Not on your lists

20529..21293
DNA (765bp) protein (255aa)

This feature has no annotations

S23_scaffold_554_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21658..22854)
DNA (1197bp) protein (399aa)
AcnD-accessory protein PrpF n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AU17_DELSC rbh
Putative AcnD-accessory protein PrpF {ECO:0000313|EMBL:KFJ08920.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
AcnD-accessory protein PrpF rbh
S23_scaffold_554_curated_19
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23264..25915)
DNA (2652bp) protein (884aa)
2-methylisocitrate dehydratase, Fe/S-dependent n=1 Tax=Acidovorax sp. CF316 RepID=J0U0R6_9BURK rbh
2-methylisocitrate dehydratase, Fe/S-dependent {ECO:0000313|EMBL:EJE49762.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
acnA; aconitate hydratase rbh
S23_scaffold_554_curated_20
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25945..27099)
DNA (1155bp) protein (385aa)
prpC; 2-methylcitrate synthase PrpC (EC:2.3.3.5) rbh
Citrate synthase n=1 Tax=Acidovorax sp. CF316 RepID=J0KES5_9BURK rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
S23_scaffold_554_curated_21
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27132..27530)
DNA (399bp) protein (133aa)
thioesterase (EC:3.1.2.1)
Acyl-CoA hydrolase n=1 Tax=Acidovorax sp. CF316 RepID=J1EBW8_9BURK
Acyl-CoA hydrolase {ECO:0000313|EMBL:EJE49764.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
S23_scaffold_554_curated_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27643..29130
DNA (1488bp) protein (496aa)
Putative transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0K852_9BURK rbh
XRE family transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29224..30621)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00035F4FA1 rbh
Tat pathway signal protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_24
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30630..32369)
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000369ABFF rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32613..36140
DNA (3528bp) protein (1176aa)
Chromosome partition protein Smc n=1 Tax=Acidovorax sp. CF316 RepID=J0U0S0_9BURK rbh
chromosome segregation protein SMC rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36346..37461
DNA (1116bp) protein (372aa)
ZipA FtsZ-binding region protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4S8_9BURK rbh
ZipA FtsZ-binding region protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_27
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37635..39815
DNA (2181bp) protein (727aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
DNA ligase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW06_9BURK rbh
DNA ligase rbh
S23_scaffold_554_curated_28
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39812..40750
DNA (939bp) protein (313aa)
NTE family protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WV64_DELAC rbh
patatin rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_554_curated_29
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40827..41471)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T473_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER60725.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Hypothetical Protein
Displaying 29 items

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