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S23_scaffold_489_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_489_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1088..2290)
DNA (1203bp) protein (401aa)
hypothetical protein id=12549725 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2290..3066)
DNA (777bp) protein (259aa)
ABC transporter-like protein id=12549724 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ABC transporter-like protein rbh
ABC transporter-like protein {ECO:0000313|EMBL:AFU47164.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_489_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3063..4412)
DNA (1350bp) protein (450aa)
RND family efflux transporter MFP subunit id=12549723 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
RND family efflux transporter MFP subunit rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4474..5871)
DNA (1398bp) protein (466aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Acidovorax sp. CF316 RepID=J1EEB0_9BURK rbh
RND efflux system outer membrane lipoprotein NodT rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6040..6699)
DNA (660bp) protein (220aa)
glutathione S-transferase-like protein; K00799 glutathione S-transferase [EC:2.5.1.18] id=12549719 bin=BDI species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glutathione S-transferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6734..6949)
DNA (216bp) protein (72aa)
hypothetical protein id=12549718 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6946..7809)
DNA (864bp) protein (288aa)
integral membrane protein id=12549717 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
integral membrane protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7817..8569)
DNA (753bp) protein (251aa)
had-superfamily hydrolase, subfamily ia, variant 3; K07025 putative hydrolase of the HAD superfamily id=12549716 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
HAD-superfamily hydrolase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8630..9070
DNA (441bp) protein (147aa)
Uncharacterized protein (Fragment) id=12549715 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9165..11423
DNA (2259bp) protein (753aa)
TonB-dependent receptor id=12549714 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
TonB-dependent receptor rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11819..12190
DNA (372bp) protein (124aa)
TraR/DksA family transcriptional regulator id=12549711 bin=BDI species=Brachymonas chironomi genus=Brachymonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TraR/DksA family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12254..13342
DNA (1089bp) protein (363aa)
ferrochelatase id=12549710 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ferrochelatase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13422..15887
DNA (2466bp) protein (822aa)
ATP-dependent protease La id=12549709 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ATP-dependent protease La rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15884..17197
DNA (1314bp) protein (438aa)
ttuD; putative hydroxypyruvate reductase TtuD (EC:1.1.1.81) rbh
Hydroxypyruvate reductase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LM61_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17479..18606
DNA (1128bp) protein (376aa)
extracellular ligand binding protein id=12549706 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
extracellular ligand binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18581..19519)
DNA (939bp) protein (313aa)
alpha/beta fold family hydrolase id=12549705 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
alpha/beta fold family hydrolase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19546..21669)
DNA (2124bp) protein (708aa)
D-(-)-3-hydroxybutyrate oligomer hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I392_9BURK rbh
D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21720..22796)
DNA (1077bp) protein (359aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Acidovorax sp. CF316 RepID=J0U578_9BURK rbh
inner-membrane translocator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_489_curated_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22945..23928)
DNA (984bp) protein (328aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002376620 rbh
inner-membrane translocator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_20
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24019..24744)
DNA (726bp) protein (242aa)
ABC transporter ATP-binding protein n=1 Tax=Acidovorax radicis RepID=UPI000237661F rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJE51284.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ABC transporter rbh
S23_scaffold_489_curated_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24741..25511)
DNA (771bp) protein (257aa)
ABC transporter-like protein id=12549698 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ABC transporter-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_489_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25601..27091)
DNA (1491bp) protein (497aa)
Fibronectin I domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I397_9BURK rbh
fibronectin I domain-containing protein rbh
Fibronectin I domain-containing protein {ECO:0000313|EMBL:AFU46975.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_489_curated_23
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27241..27750)
DNA (510bp) protein (170aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZP4_9BURK rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EHL22183.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
extracellular ligand-binding receptor rbh
Displaying 23 items

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