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S23_scaffold_84_curated

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_84_curated_1
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..139)
DNA (138bp) protein (46aa)
Transposase n=2 Tax=Bacteria RepID=A6N8V5_9BACT
Transposase {ECO:0000313|EMBL:KJA10367.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
transposase, IS4
S23_scaffold_84_curated_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

299..829
DNA (531bp) protein (177aa)
Pilin n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUR0_9BURK
Pilin {ECO:0000313|EMBL:EHL23838.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
pilus assembly protein
S23_scaffold_84_curated_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

841..1668
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUR1_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL23839.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
S23_scaffold_84_curated_4
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2157..3149)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000378FF6B rbh
Mobile element protein {ECO:0000313|EMBL:CDS54512.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
transposase IS4 family protein rbh
S23_scaffold_84_curated_5
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3301..3678)
DNA (378bp) protein (126aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNI1_POLNA
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ABM37209.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
S23_scaffold_84_curated_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3774..4202)
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Ribonuclease VapC n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA87_ACISJ
PilT domain-containing protein
S23_scaffold_84_curated_7
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4206..4451)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AGC4_NITEC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI59608.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
S23_scaffold_84_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4601..6223
DNA (1623bp) protein (541aa)
O-antigen polymerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I532_9BURK rbh
O-antigen polymerase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_9
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6323..7297)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74B07_GEOSL rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
S23_scaffold_84_curated_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7376..7873)
DNA (498bp) protein (166aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T586_ACIDE
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
molybdenum cofactor biosynthesis protein C
S23_scaffold_84_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8059..9510
DNA (1452bp) protein (484aa)
peptidase M48 n=1 Tax=Acidovorax radicis RepID=UPI0002375FA5 rbh
peptidase M48 Ste24p rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9478..9831)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TD11_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER57637.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
S23_scaffold_84_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9909..10643)
DNA (735bp) protein (245aa)
Integral membrane protein, YjbE family n=1 Tax=Variovorax sp. CF313 RepID=J2TMA8_9BURK rbh
yjbE; putative integral membrane protein YjbE rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10936..11361
DNA (426bp) protein (142aa)
hypothetical protein; K06938 id=12550701 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11434..11709
DNA (276bp) protein (92aa)
hypothetical protein id=12550700 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11836..12396)
DNA (561bp) protein (187aa)
yaeq family protein id=12550699 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
yaeq family protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12474..13853)
DNA (1380bp) protein (460aa)
adenylosuccinate lyase (EC:4.3.2.2) id=12550697 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
adenylosuccinate lyase (EC:4.3.2.2) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13958..14572
DNA (615bp) protein (205aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] id=12550696 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glutathione S-transferase domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_19
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14696..15145)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUS2_9BURK
Isomerase {ECO:0000313|EMBL:KJA12274.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
S23_scaffold_84_curated_20
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15145..15927)
DNA (783bp) protein (261aa)
short-chain dehydrogenase/reductase SDR id=12550694 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KJA12273.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
short-chain dehydrogenase/reductase SDR rbh
S23_scaffold_84_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15924..16469)
DNA (546bp) protein (182aa)
Putative lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYS6_9BURK rbh
lipoprotein rbh
Putative lipoprotein {ECO:0000313|EMBL:AFU48323.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_84_curated_22
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16466..17773)
DNA (1308bp) protein (436aa)
Na+/melibiose symporter-like transporter n=1 Tax=Acidovorax sp. CF316 RepID=J0KC81_9BURK rbh
Na+/melibiose symporter-like transporter {ECO:0000313|EMBL:EJE48728.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
major facilitator superfamily transporter rbh
S23_scaffold_84_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17770..18327)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VM88_POLNA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18324..19541)
DNA (1218bp) protein (406aa)
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Acidovorax radicis RepID=UPI0002375FBA rbh
cyclopropane-fatty-acyl-phospholipid synthase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19568..20338)
DNA (771bp) protein (257aa)
hypothetical protein id=12550688 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20335..21639)
DNA (1305bp) protein (435aa)
Amine oxidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYS3_9BURK rbh
amine oxidase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21875..22474)
DNA (600bp) protein (200aa)
peroxiredoxin id=12550684 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
peroxiredoxin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22607..23566
DNA (960bp) protein (320aa)
MerR family transcriptional regulator id=12550683 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
MerR family transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23536..24738)
DNA (1203bp) protein (401aa)
Putative metal dependent phosphohydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T408_ACIDE rbh
putative metal dependent phosphohydrolase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_84_curated_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24837..27914)
DNA (3078bp) protein (1026aa)
acriflavin resistance protein id=12550834 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
acriflavin resistance protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying items 1-30 of 102 in total

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