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S23_scaffold_117_curated

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_117_curated_1
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2311)
DNA (2310bp) protein (770aa)
Core protein n=1 Tax=Ralstonia solanacearum UW551 RepID=A3RPX4_RALSL
Core protein {ECO:0000313|EMBL:EAP74329.1}; TaxID=342110 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum UW551.;"
conserved exported protein of unknown function, putative rhs-related protein
S23_scaffold_117_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2965..3879)
DNA (915bp) protein (305aa)
phosphoesterase, DHHA1 id=12551081 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
phosphoesterase, DHHA1 rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3950..4411
DNA (462bp) protein (154aa)
hypothetical protein id=12551082 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4411..5166
DNA (756bp) protein (252aa)
pseudouridine synthase id=12551084 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
pseudouridine synthase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5147..6085)
DNA (939bp) protein (313aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICP4_9BURK rbh
succinylglutamate desuccinylase/aspartoacylase rbh
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:AFU47041.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_117_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6370..6513
DNA (144bp) protein (48aa)
hypothetical protein id=12551085 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6535..7485)
DNA (951bp) protein (317aa)
GTP-binding protein, HSR1-like protein id=12551090 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
GTP-binding protein, HSR1-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7529..8467)
DNA (939bp) protein (313aa)
ubia prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] id=12551093 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
UbiA prenyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8669..9880
DNA (1212bp) protein (404aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0J5_9BURK rbh
UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9980..11509)
DNA (1530bp) protein (510aa)
glutamate--cysteine ligase id=12551097 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glutamate--cysteine ligase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11642..12550)
DNA (909bp) protein (303aa)
short-chain dehydrogenase/reductase sdr id=12551098 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
short-chain dehydrogenase/reductase sdr rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12694..13578
DNA (885bp) protein (295aa)
NUDIX hydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ40_ALIDB rbh
nudix hydrolase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13801..14712)
DNA (912bp) protein (304aa)
branched-chain amino acid transferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E1467 rbh
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:GAD21350.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
class IV aminotransferase rbh
S23_scaffold_117_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14884..15162
DNA (279bp) protein (93aa)
hypothetical protein id=12551100 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15528..16154
DNA (627bp) protein (209aa)
hypothetical protein id=12551101 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_16
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16160..16453
DNA (294bp) protein (98aa)
ferredoxin n=1 Tax=Acidovorax radicis RepID=UPI0002375BB2
Ferredoxin {ECO:0000313|EMBL:KJA10818.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
ferredoxin
S23_scaffold_117_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16681..17802
DNA (1122bp) protein (374aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C185_9BURK rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17814..18278
DNA (465bp) protein (155aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=12551104 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18275..18802
DNA (528bp) protein (176aa)
NusB antitermination factor id=12551105 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
NusB antitermination factor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18880..20064
DNA (1185bp) protein (395aa)
aminotransferase id=12551106 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
aminotransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20067..20483
DNA (417bp) protein (139aa)
tol-pal system-associated acyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] id=12551107 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tol-pal system-associated acyl-CoA thioesterase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20480..21184
DNA (705bp) protein (235aa)
protein TolQ; K03562 biopolymer transport protein TolQ id=12551108 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
protein TolQ rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_23
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21202..21624
DNA (423bp) protein (141aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q4Y2_ACIAP
Biopolymer transporter ExbD {ECO:0000313|EMBL:KJA10824.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
biopolymer transport protein ExbD/TolR
S23_scaffold_117_curated_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21653..22591
DNA (939bp) protein (313aa)
Cell division and transport-associated protein TolA n=2 Tax=Acidovorax RepID=A1W9I9_ACISJ rbh
protein tola rbh
Cell division and transport-associated protein TolA {ECO:0000313|EMBL:ABM42914.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
S23_scaffold_117_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22663..24027
DNA (1365bp) protein (455aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-] id=12551115 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
peptidase U32 rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24349..24981
DNA (633bp) protein (211aa)
hypothetical protein id=12551116 bin=BDI species=Pseudomonas caeni genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_27
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25085..27670)
DNA (2586bp) protein (862aa)
acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3 4.2.1.99) rbh
Aconitate hydratase 2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9C5_ACIDE rbh
Tax=GWA2_Curvibacter_64_110_curated
S23_scaffold_117_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27741..28370)
DNA (630bp) protein (210aa)
hypothetical protein id=12551119 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28399..29469)
DNA (1071bp) protein (357aa)
HpcH/HpaI aldolase id=12551120 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
HpcH/HpaI aldolase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_117_curated_30
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29476..30462)
DNA (987bp) protein (329aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
malate dehydrogenase (EC:1.1.1.37) rbh
Malate dehydrogenase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7B9_ACIDE rbh
Displaying items 1-30 of 84 in total

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