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S23_scaffold_250_curated

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_250_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93..1343
DNA (1251bp) protein (417aa)
MFS transporter n=1 Tax=Acidovorax radicis RepID=UPI0002377FBC rbh
major facilitator superfamily protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_250_curated_2
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1430..2854)
DNA (1425bp) protein (475aa)
D-lactate dehydrogenase n=1 Tax=Acidovorax avenae RepID=UPI00031F8B09 rbh
FAD linked oxidase domain-containing protein rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABM30708.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
S23_scaffold_250_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2946..3323)
DNA (378bp) protein (126aa)
Calcium-binding EF-hand-containing protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8Q5_ACIDE
calcium-binding EF-hand-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_250_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3508..4074
DNA (567bp) protein (189aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8Q4_ACIDE rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_250_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4244..5830
DNA (1587bp) protein (529aa)
Methyl-accepting chemotaxis protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T177_JANMA rbh
tar11; methyl-accepting chemotaxis protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_250_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5869..6303
DNA (435bp) protein (145aa)
Hemerythrin-like metal-binding protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8Q1_ACIDE
Methyl-accepting chemotaxis protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_250_curated_7
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6368..6790)
DNA (423bp) protein (141aa)
Thioesterase superfamily protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8Q0_ACIDE
Esterase {ECO:0000313|EMBL:KJA11002.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
S23_scaffold_250_curated_8
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6878..8440)
DNA (1563bp) protein (521aa)
succinate CoA transferase (EC:3.1.2.1) rbh
acetyl-CoA hydrolase n=1 Tax=Acidovorax radicis RepID=UPI000237834E rbh
Acetyl-CoA hydrolase {ECO:0000313|EMBL:EHL23057.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
S23_scaffold_250_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8488..9804)
DNA (1317bp) protein (439aa)
Uracil-xanthine permease n=1 Tax=Acidovorax sp. CF316 RepID=J0KFN0_9BURK rbh
uracil-xanthine permease rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_250_curated_10
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9892..11235)
DNA (1344bp) protein (448aa)
fumarylacetoacetase (EC:3.7.1.2) rbh
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZX64_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI52275.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
S23_scaffold_250_curated_11
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11238..12047)
DNA (810bp) protein (270aa)
cyclase n=1 Tax=Variovorax paradoxus RepID=UPI00037CE560 rbh
cyclase family protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S23_scaffold_250_curated_12
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12076..13395)
DNA (1320bp) protein (440aa)
TRAP dicarboxylate transporter DctM subunit n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28QQ8_JANSC rbh
TRAP C4-dicarboxylate transport system permease DctM rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S23_scaffold_250_curated_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13392..13973)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMH7_TISMK
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S23_scaffold_250_curated_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14090..15163)
DNA (1074bp) protein (358aa)
C4-dicarboxylate-binding periplasmic protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMH8_TISMK rbh
dctP; C4-dicarboxylate-binding periplasmic protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S23_scaffold_250_curated_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15175..15855)
DNA (681bp) protein (227aa)
Transcriptional regulator, TetR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW71_VARPS
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACS16769.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
S23_scaffold_250_curated_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15946..18246
DNA (2301bp) protein (767aa)
acetoacetyl-CoA synthetase (EC:6.2.1.1) rbh
Acetoacetyl-CoA synthase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W234_ACISJ rbh
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:ABM40309.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
S23_scaffold_250_curated_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18327..18959
DNA (633bp) protein (211aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Acidovorax radicis RepID=UPI000237869E rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S23_scaffold_250_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19046..19969)
DNA (924bp) protein (308aa)
multidrug DMT transporter permease n=1 Tax=Acidovorax radicis RepID=UPI00023786A4 rbh
transporter rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_250_curated_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20066..21523)
DNA (1458bp) protein (486aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI00023786A5 rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S23_scaffold_250_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21807..22574
DNA (768bp) protein (256aa)
septum site-determining protein MinC n=1 Tax=Acidovorax radicis RepID=UPI00023786A6 rbh
septum site-determining protein minc rbh
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_250_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22780..23595
DNA (816bp) protein (272aa)
Site-determining protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4P2_9BURK rbh
septum site-determining protein MinD rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_250_curated_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23599..23865
DNA (267bp) protein (89aa)
Cell division topological specificity factor n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWY5_9BURK
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
cell division topological specificity factor MinE
S23_scaffold_250_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23960..24550)
DNA (591bp) protein (197aa)
MOSC domain containing protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5F4_ACIDE rbh
MOSC domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_250_curated_24
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24558..25013)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037B82CA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
S23_scaffold_250_curated_25
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25126..25773)
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD4_RHOFD rbh
two component LuxR family transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
S23_scaffold_250_curated_26
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25770..27899)
DNA (2130bp) protein (710aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD5_RHOFD rbh
multi-sensor signal transduction histidine kinase rbh
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
S23_scaffold_250_curated_27
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28006..29037
DNA (1032bp) protein (344aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD6_RHOFD rbh
TRAP dicarboxylate transporter subunit DctP rbh
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ABD69217.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S23_scaffold_250_curated_28
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29151..30134
DNA (984bp) protein (328aa)
C4-dicarboxylate-binding protein id=1326787 bin=GWE1_T_denit_62_9 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
TRAP transporter solute receptor, DctP family
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
S23_scaffold_250_curated_29
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30196..30723
DNA (528bp) protein (176aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TH44_TISMK
tripartite AtP-independent periplasmic transporter subunit DctQ
Tax=CG_Rhodof_02
S23_scaffold_250_curated_30
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30720..32003
DNA (1284bp) protein (428aa)
C4-dicarboxylate transporter id=1326790 bin=GWE1_T_denit_62_9 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
TRAP transporter, DctM subunit
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
Displaying items 1-30 of 46 in total

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