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S23_scaffold_93_curated_6

Organism: S23_RifCSP_Comamonadaceae_63_35_curated

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(4601..5479)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 292.0
  • Bit_score: 513
  • Evalue 1.40e-142
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 292.0
  • Bit_score: 501
  • Evalue 1.40e-139
  • rbh
Diaminopimelate epimerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBF1_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 292.0
  • Bit_score: 513
  • Evalue 1.00e-142
  • rbh

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Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGAAGATTCGCTTCACCAAAATGCAAGGCGCGGGCAACGATTTCGTCGTGCTCGACGAAACCCAGGGCCCGCTGGGCCTGACGACGGCCCAATACCGCTTTCTGGCCGACCGGCACTTTGGTGTCGGTGCCGACCAGATCCTCTCGGTGCGGCCCTCGCCGGGCGAGGGGATCGACTTTGAATACGCCATACACAACGCCGACGGCAGCGAGGTGGAGCAGTGCGGCAACGGAGCGCGCTGTTTTGCACGCTATGTGCGCGACAAGGGTTTGACCACGCGCGACACCATCCGGGTGCAGACGCTCTCGGGCGTGATTGCTCCCCAGCTCACCCCCGATGGCCGCGTGACGGTGGACATGGGTCGCCCCGTGTTCGACCCGGCGCGCGTGCCGTTCGACGCATCAGGCCTTGCGCCCGTGTCCCAGGGTTCGGGGCAAAAATGGCCTCTAGCGCTTGATGCGCAAGCGCAACAAGCTACTGTTTTTGTAGCGGTTGTGTCCATGGGTAACCCGCACGCCGTGCAACTGGTTCAGGATGTGGACACCGCGCCCGTGCTGCTGACCGGCCCGCTCATCGAGCGCCATGCGCGCTTTCCGCAGCGGGTCAACGCGGGCTTTTTGCAGGTGCTGGACTGCGGGCATGTGCGCCTGCGCGTGTATGAGCGCGGCGCCGGTGAAACCCTGGCCTGCGGCACGGGTGCCTGCGCGGCCGTGGCGGCGGGTATCCGGCTGGGGCTGCTCGATGCGCGCGTGCATGTACAAACGCACGGCGGCTTGCTCACCATTGCCTGGAGCGGCGACGAGGCCGACTCCGTTTTCATGACCGGCCCGGCCACTACCGTGTTCGAAGGCCAGATCGACATCCCTGACGCACCATGA
PROTEIN sequence
Length: 293
MKIRFTKMQGAGNDFVVLDETQGPLGLTTAQYRFLADRHFGVGADQILSVRPSPGEGIDFEYAIHNADGSEVEQCGNGARCFARYVRDKGLTTRDTIRVQTLSGVIAPQLTPDGRVTVDMGRPVFDPARVPFDASGLAPVSQGSGQKWPLALDAQAQQATVFVAVVSMGNPHAVQLVQDVDTAPVLLTGPLIERHARFPQRVNAGFLQVLDCGHVRLRVYERGAGETLACGTGACAAVAAGIRLGLLDARVHVQTHGGLLTIAWSGDEADSVFMTGPATTVFEGQIDIPDAP*