ggKbase home page

S23_scaffold_93_curated

Search features with annotation key words

Displaying items 1-30 of 165 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S23_scaffold_93_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..587)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T627_ACIDE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(633..1361)
DNA (729bp) protein (243aa)
TraR/DksA family transcriptional regulator id=12551190 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
TraR/DksA family transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_3
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1543..2610)
DNA (1068bp) protein (356aa)
cobalamin biosynthesis protein CobW n=1 Tax=Acidovorax avenae RepID=UPI0002EDDC2A rbh
cobalamin synthesis protein P47K rbh
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ADX44661.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
S23_scaffold_93_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2790..3752)
DNA (963bp) protein (321aa)
phage integrase family protein id=12551179 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
phage integrase family protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3918..4604)
DNA (687bp) protein (229aa)
hypothetical protein id=12551178 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4601..5479)
DNA (879bp) protein (293aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
dapF; diaminopimelate epimerase (EC:5.1.1.7) rbh
Diaminopimelate epimerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBF1_ACIDE rbh
S23_scaffold_93_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5554..6258
DNA (705bp) protein (235aa)
glutathione S-transferase domain-containing protein; K11209 GST-like protein id=12551176 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glutathione S-transferase domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6436..8118
DNA (1683bp) protein (561aa)
Beta-lactamase domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T878_ACIDE rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:EER59325.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
beta-lactamase domain-containing protein rbh
S23_scaffold_93_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8244..9011
DNA (768bp) protein (256aa)
RNA-binding S4 domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFT4_ACIET rbh
RNA-binding s4 domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_10
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9045..10100)
DNA (1056bp) protein (352aa)
5-methylcytosine-specific restriction enzyme subunit McrC n=1 Tax=Citreicella sp. SE45 RepID=D0D6B3_9RHOB rbh
5-methylcytosine-specific restriction enzyme subunit McrC {ECO:0000313|EMBL:EEX16170.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
5-methylcytosine-specific restriction enzyme subunit McrC rbh
S23_scaffold_93_curated_11
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10104..11906)
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FC3A1 rbh
ATPase AAA {ECO:0000313|EMBL:KHS09663.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
AAA domain family protein
S23_scaffold_93_curated_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12016..12264
DNA (249bp) protein (83aa)
RNA-binding S4 domain-containing protein; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] id=12551171 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RNA-binding S4 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12531..13781
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXA3_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU44445.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_93_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13960..15150
DNA (1191bp) protein (397aa)
Peptidase M48, Ste24p n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZZ7_9BURK rbh
peptidase M48, Ste24p rbh
Peptidase M48, Ste24p {ECO:0000313|EMBL:AFU44444.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_93_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15704..16312
DNA (609bp) protein (203aa)
methyltransferase id=12551167 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
S-adenosylmethionine-dependent methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16471..17388
DNA (918bp) protein (306aa)
cysteine synthase id=12551166 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
cysteine synthase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17524..19278
DNA (1755bp) protein (585aa)
FAD-dependent oxidoreductase n=1 Tax=Acidovorax radicis RepID=UPI0002375BEB rbh
FAD dependent oxidoreductase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_18
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19465..20484
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9X8_ACIDE rbh
sulfatase-modifying factor protein rbh
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
S23_scaffold_93_curated_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20516..21394)
DNA (879bp) protein (293aa)
heat shock protein HtpX id=12551157 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
heat shock protein HtpX rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21458..22213)
DNA (756bp) protein (252aa)
Putative transmembrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUK9_9BURK rbh
transmembrane protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22198..23247)
DNA (1050bp) protein (350aa)
dihydroorotase (EC:3.5.2.3) rbh
Dihydroorotase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFV8_ACIET rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_22

Not on your lists

comp(23310..23501)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DH88_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96746.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S23_scaffold_93_curated_23
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23645..24382)
DNA (738bp) protein (246aa)
Phosphonate-transporting ATPase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUK2_9BURK rbh
ABC transporter-like protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S23_scaffold_93_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24417..25082)
DNA (666bp) protein (222aa)
Polar amino acid ABC transporter permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0I667_9BURK rbh
polar amino acid ABC transporter permease rbh
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:AFU44421.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S23_scaffold_93_curated_25
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25084..25836)
DNA (753bp) protein (251aa)
Polar amino acid ABC transporter inner membrane protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUK4_9BURK rbh
Polar amino acid ABC transporter inner membrane protein {ECO:0000313|EMBL:EHL23976.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
polar amino acid ABC transporter permease rbh
S23_scaffold_93_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25924..26823)
DNA (900bp) protein (300aa)
extracellular solute-binding protein id=12551150 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria rbh
extracellular solute-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_27
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26951..27838)
DNA (888bp) protein (296aa)
Extracellular solute-binding protein family 3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5P9_ACIDE rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:EER60192.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
extracellular solute-binding protein rbh
S23_scaffold_93_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28035..29198)
DNA (1164bp) protein (388aa)
LysR family transcriptional regulator id=12551149 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S23_scaffold_93_curated_29
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29225..29788
DNA (564bp) protein (188aa)
TRAP dicarboxylate transporter subunit DctQ n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUK8_9BURK rbh
TRAP dicarboxylate transporter subunit DctQ {ECO:0000313|EMBL:EHL23980.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
tripartite ATP-independent periplasmic
S23_scaffold_93_curated_30
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29785..31083
DNA (1299bp) protein (433aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUK9_9BURK rbh
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EHL23981.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
TRAP dicarboxylate transporter subunit DctM rbh
Displaying items 1-30 of 165 in total

View Taxonomy