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S24_scaffold_433_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_433_curated_1
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

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939..3608
DNA (2670bp) protein (890aa)
Osmosensitive K+ channel histidine kinase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IUW2_DESMD rbh
Histidine kinase {ECO:0000313|EMBL:KJS50230.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
osmosensitive K+ channel histidine kinase rbh
S24_scaffold_433_curated_2
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3610..4293
DNA (684bp) protein (228aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XW22_9FIRM rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:KJS50231.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
S24_scaffold_433_curated_3
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4293..5651
DNA (1359bp) protein (453aa)
Potassium uptake protein, TrkH family n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7ITR0_DESMD rbh
TrkH family potassium uptake protein rbh
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:AFQ42493.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
S24_scaffold_433_curated_4
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5664..6314
DNA (651bp) protein (217aa)
Ktr system potassium uptake protein A n=1 Tax=Desulfosporosinus sp. OT RepID=G2FSK2_9FIRM rbh
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:KJR49270.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
K+ transport system, NAD-binding component rbh
S24_scaffold_433_curated_5
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6438..6986
DNA (549bp) protein (183aa)
Putative lipoprotein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FN73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS50063.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein
S24_scaffold_433_curated_6
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7348..7695)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FN72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJR49264.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein
S24_scaffold_433_curated_7
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7928..9844
DNA (1917bp) protein (639aa)
Carbon-monoxide dehydrogenase, catalytic subunit {ECO:0000313|EMBL:EGW41042.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EGW41042.1};; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
Carbon-monoxide dehydrogenase, catalytic subunit n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XS20_9FIRM rbh
carbon-monoxide dehydrogenase, catalytic subunit rbh
S24_scaffold_433_curated_8
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10140..10706
DNA (567bp) protein (189aa)
TetR family transcriptional regulator n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002DB493C
Transcriptional regulator {ECO:0000313|EMBL:KJR49238.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
TetR family transcriptional regulator
S24_scaffold_433_curated_9
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10977..12557
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0003154049 rbh
Putative antigen {ECO:0000313|EMBL:KJR49237.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
myosin-crossreactive antigen rbh
S24_scaffold_433_curated_10
bacterium UASB14, Bacteria

Not on your lists

comp(12758..13105)
DNA (348bp) protein (116aa)
Anti-sigma factor antagonist n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ91_9CHLR
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
anti-sigma-factor antagonist
S24_scaffold_433_curated_11
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13098..13559)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000360C637
putative anti-sigma regulatory factor
Tax=RBG_16_Deltaproteobacteria_49_23_curated
S24_scaffold_433_curated_12
unknown

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14452..14694
DNA (243bp) protein (81aa)

This feature has no annotations

S24_scaffold_433_curated_13
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15807..16142)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036E7A3E
Stage II sporulation protein E (SpoIIE)
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:AGA56458.1}; Flags: Precursor;; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
S24_scaffold_433_curated_14
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16147..16707
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FFT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS69950.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
S24_scaffold_433_curated_15
unknown

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16782..17027
DNA (246bp) protein (82aa)

This feature has no annotations

S24_scaffold_433_curated_16
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17220..17900
DNA (681bp) protein (227aa)
B12 binding domain protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FNY8_9FIRM rbh
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:KJR49261.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
cobalamin binding protein rbh
S24_scaffold_433_curated_17
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17893..18591
DNA (699bp) protein (233aa)
Transcriptional regulator n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IYZ3_DESMD rbh
Putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family {ECO:0000313|EMBL:KJR49260.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
transcriptional regulator rbh
S24_scaffold_433_curated_18
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18584..20491
DNA (1908bp) protein (636aa)
Putative metal-binding protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J227_DESMD rbh
Ferredoxin {ECO:0000313|EMBL:KJS48415.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
metal-binding protein rbh
S24_scaffold_433_curated_19
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20733..21545
DNA (813bp) protein (271aa)
Pterin binding enzyme family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FNY6_9FIRM rbh
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:KJR49258.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
Pterin binding enzyme rbh
S24_scaffold_433_curated_20
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21574..22212
DNA (639bp) protein (213aa)
B12 binding domain protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FNY5_9FIRM rbh
B12 binding domain protein {ECO:0000313|EMBL:EGW40655.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
cobalamin binding protein rbh
S24_scaffold_433_curated_21
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22214..23368
DNA (1155bp) protein (385aa)
Uroporphyrinogen decarboxylase (URO-D) n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IUF0_DESMD rbh
Uroporphyrinogen-III decarboxylase {ECO:0000313|EMBL:KJR49256.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
uroporphyrinogen decarboxylase rbh
S24_scaffold_433_curated_22
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23390..23533
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IYZ1_DESMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFQ45334.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
S24_scaffold_433_curated_23
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24050..25195
DNA (1146bp) protein (382aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J223_DESMD rbh
Sugar transporter {ECO:0000313|EMBL:KJS48407.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
glycoside/pentoside/hexuronide transporter rbh
Displaying 23 items

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