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S24_scaffold_632_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_632_curated_1
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..446)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNI3_9BACI
Thiol:disulfide interchange protein (Thioredoxin) {ECO:0000313|EMBL:EWG09160.1}; TaxID=1307436 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus firmus DS1.;"
ahpC/TSA family protein
S24_scaffold_632_curated_2
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(474..1286)
DNA (813bp) protein (271aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WVM3_ALIAD rbh
cytochrome c biogenesis protein transmembrane region rbh
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:ACV58145.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC; 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 /; 104-1A) (Bacillus acidocaldarius).;"
S24_scaffold_632_curated_3
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1462..2598)
DNA (1137bp) protein (379aa)
Permease family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FRY7_9FIRM rbh
ABC transporter permease {ECO:0000313|EMBL:KJS50124.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
lipoprotein release ABC transporter permease rbh
S24_scaffold_632_curated_4
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2700..3863)
DNA (1164bp) protein (388aa)
Permease family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FRY6_9FIRM rbh
ABC transporter permease {ECO:0000313|EMBL:KJS50123.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
lipoprotein release ABC transporter permease rbh
S24_scaffold_632_curated_5
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3877..4545)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FRY5_9FIRM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS50122.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
antimicrobial peptide ABC transporter ATPase rbh
S24_scaffold_632_curated_6
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4687..5271)
DNA (585bp) protein (195aa)
Putative membrane protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IR64_DESMD rbh
Putative membrane protein {ECO:0000313|EMBL:KJR46451.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein rbh
S24_scaffold_632_curated_7
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5446..6813)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IM65_DESMD rbh
Nitrogen assimilation regulatory protein {ECO:0000313|EMBL:KJR45486.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein rbh
S24_scaffold_632_curated_8
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6813..7463)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IVD8_DESMD
Uncharacterized protein {ECO:0000313|EMBL:KJR45487.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein
S24_scaffold_632_curated_9
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7744..9102
DNA (1359bp) protein (453aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XSN6_9FIRM rbh
Response regulator of zinc sigma-54-dependent two-component system {ECO:0000313|EMBL:KJR46448.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains rbh
S24_scaffold_632_curated_10
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9164..10294
DNA (1131bp) protein (377aa)
Signal transduction histidine kinase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XSN7_9FIRM rbh
Kinase {ECO:0000313|EMBL:KJS46213.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
signal transduction histidine kinase rbh
S24_scaffold_632_curated_11
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10424..10780)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMJ6_CLOPA
MmcQ {ECO:0000313|EMBL:KJS47994.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein
S24_scaffold_632_curated_12
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11430..12422
DNA (993bp) protein (331aa)
Transcriptional regulator n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WCG3_DESOD rbh
Ribose operon repressor {ECO:0000313|EMBL:KJR46446.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
transcriptional regulator rbh
S24_scaffold_632_curated_13
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12423..13373
DNA (951bp) protein (317aa)
Ribokinase n=1 Tax=Desulfosporosinus sp. OT RepID=G2FYL1_9FIRM rbh
Ribokinase {ECO:0000313|EMBL:KJR46445.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
ribokinase rbh
S24_scaffold_632_curated_14
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13345..13740
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
D-ribose pyranase n=1 Tax=Desulfosporosinus sp. OT RepID=G2FYL2_9FIRM
ABC-type ribose transport system, auxiliary component
S24_scaffold_632_curated_15
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13764..15260
DNA (1497bp) protein (499aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
RbsA n=1 Tax=Desulfosporosinus sp. OT RepID=G2FYL3_9FIRM rbh
sugar ABC transporter ATPase rbh
S24_scaffold_632_curated_16
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15253..16191
DNA (939bp) protein (313aa)
Branched-chain amino acid transport system / permease component family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FYL4_9FIRM rbh
Ribose ABC transport system, permease protein RbsC {ECO:0000313|EMBL:KJR46442.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
ribose/xylose/arabinose/galactoside ABC transporter permease rbh
S24_scaffold_632_curated_17
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16445..17380
DNA (936bp) protein (312aa)
RbsB n=1 Tax=Desulfosporosinus sp. OT RepID=G2FYL5_9FIRM rbh
Ribose ABC transport system, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:KJR46441.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
sugar ABC transporter periplasmic protein rbh
S24_scaffold_632_curated_18
unknown

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17718..17810
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 18 items

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