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S24_scaffold_2215_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_2215_curated_1
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(222..1670)
DNA (1449bp) protein (483aa)
glutamyl-tRNA synthetase (EC:6.1.1.17) rbh
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
Glutamate--tRNA ligase n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D160_DESAJ rbh
S24_scaffold_2215_curated_2
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1787..2245)
DNA (459bp) protein (153aa)
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IL87_DESMD
S24_scaffold_2215_curated_3
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2469..3179)
DNA (711bp) protein (237aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Desulfosporosinus sp. OT RepID=G2FRC6_9FIRM rbh
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase rbh
S24_scaffold_2215_curated_4
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3172..4326)
DNA (1155bp) protein (385aa)
PIN domain protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FRC7_9FIRM rbh
PIN domain protein {ECO:0000313|EMBL:EGW39893.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
integral membrane protein rbh
S24_scaffold_2215_curated_5
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4528..5010)
DNA (483bp) protein (161aa)
CarD-like/TRCF domain protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FRC8_9FIRM rbh
CarD-like/TRCF domain protein {ECO:0000313|EMBL:EGW39894.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
CarD-like transcriptional regulator
S24_scaffold_2215_curated_6
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5194..5586
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FRC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGP76323.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
hypothetical protein
S24_scaffold_2215_curated_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5698..6006)
DNA (309bp) protein (103aa)
DEAD/DEAH box helicase domain protein n=4 Tax=Clostridium thermocellum RepID=E6UT32_CLOTL
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:EEB76182.1}; Uncharacterized protein {ECO:0000313|EMBL:KKC30226.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
Displaying 7 items

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