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S24_scaffold_432_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_432_curated_1
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1..1623)
DNA (1623bp) protein (541aa)
Hydrogenase, Fe-only n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H594_CELFA rbh
hydrogenase, Fe-only rbh
Tax=BJP_IG2157_Actinomycetales_63_19
S24_scaffold_432_curated_2
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1811..2812)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003801AF0 rbh
hypothetical protein rbh
Tax=RBG_16_Bathyarchaeota_48_13_curated
S24_scaffold_432_curated_3
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2955..3953)
DNA (999bp) protein (333aa)
carbamate kinase (EC:2.7.2.2) rbh
Carbamate kinase n=2 Tax=Clostridium RepID=D8GJV5_CLOLD rbh
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
S24_scaffold_432_curated_4
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3963..4973)
DNA (1011bp) protein (337aa)
Putrescine carbamoyltransferase {ECO:0000313|EMBL:KGM16165.1}; EC=2.1.3.3 {ECO:0000313|EMBL:KGM16165.1};; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
Putrescine carbamoyltransferase (EC:2.1.3.3) rbh
putrescine carbamoyltransferase n=1 Tax=Caldibacillus debilis RepID=UPI0003674680 rbh
S24_scaffold_432_curated_5
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5195..6292)
DNA (1098bp) protein (366aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
agmatine deiminase (EC:3.5.3.12) rbh
Porphyromonas-type peptidyl-arginine deiminase family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDU8_9CAUL rbh
S24_scaffold_432_curated_6
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6298..7800)
DNA (1503bp) protein (501aa)
Amino acid permease-associated region n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS81_PARL1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM16163.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
amino acid permease-associated protein rbh
S24_scaffold_432_curated_7
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8129..8755)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Mycobacterium tuberculosis RepID=UPI0001D31F84
Uncharacterized protein {ECO:0000313|EMBL:KGM16162.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
S24_scaffold_432_curated_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8960..9370)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SM28_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82863.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S24_scaffold_432_curated_9
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9476..11728)
DNA (2253bp) protein (751aa)
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00016842}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00016842};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
6-phosphofructokinase (EC:2.7.1.11) rbh
6-phosphofructokinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJN0_ACCPU rbh
S24_scaffold_432_curated_10
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11803..12315
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XN66_MICPN
Uncharacterized protein {ECO:0000313|EMBL:KGM16952.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
S24_scaffold_432_curated_11
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12470..13105
DNA (636bp) protein (212aa)
Transcriptional regulator n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8G9Z9_9PSEU
Transcriptional regulator {ECO:0000313|EMBL:EHY87555.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
TetR family transcriptional regulator
S24_scaffold_432_curated_12
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13102..14091
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XFK0_MICPN rbh
Carboxylate/amino acid/amine transporter {ECO:0000313|EMBL:CDO19818.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
hypothetical protein rbh
S24_scaffold_432_curated_13
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14182..14634)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5W7_CELGA
Uncharacterized protein {ECO:0000313|EMBL:KGM09221.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
S24_scaffold_432_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14765..15196
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH78_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90259.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
S24_scaffold_432_curated_15
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15229..16479
DNA (1251bp) protein (417aa)
HI0933 family protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A483_CELGA rbh
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:KGM03952.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
HI0933 family protein rbh
S24_scaffold_432_curated_16
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16476..17435)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA80048.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
leucine-rich repeat-containing protein
S24_scaffold_432_curated_17
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17657..19093)
DNA (1437bp) protein (479aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E1G4_9MICO rbh
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:CCH70702.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
pyridoxal-dependent decarboxylase rbh
S24_scaffold_432_curated_18
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19090..20421)
DNA (1332bp) protein (444aa)
Major facilitator transporter n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DX23_9MICO rbh
Major facilitator transporter {ECO:0000313|EMBL:EKA60939.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
major facilitator transporter rbh
S24_scaffold_432_curated_19
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20514..21779)
DNA (1266bp) protein (422aa)
cysteine desulfurase (EC:2.8.1.7) rbh
Cysteine desulfurase {ECO:0000313|EMBL:CCH90778.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CCH90778.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Cysteine desulfurase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F565_MODMB rbh
S24_scaffold_432_curated_20
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22136..22909
DNA (774bp) protein (258aa)
SAM-dependent methyltransferase n=1 Tax=Williamsia sp. D3 RepID=V8D181_9ACTO
SAM-dependent methyltransferase {ECO:0000313|EMBL:ETD33177.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
type 11 methyltransferase
S24_scaffold_432_curated_21
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23532..24233)
DNA (702bp) protein (234aa)
Putative transmembrane protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L3K8_FRASN
Uncharacterized protein {ECO:0000313|EMBL:KGM12609.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
putative transmembrane protein
S24_scaffold_432_curated_22
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24419..25123
DNA (705bp) protein (235aa)
SC5G5.07; peptidase E (EC:3.4.13.21)
hypothetical protein n=1 Tax=Streptomyces sp. AA0539 RepID=UPI0002F8A2B9
Peptidase {ECO:0000313|EMBL:KEP23270.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
S24_scaffold_432_curated_23
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25145..25378)
DNA (234bp) protein (78aa)
transcriptional regulator n=1 Tax=Streptomyces RepID=UPI00037DE163
Transcriptional regulator {ECO:0000313|EMBL:AJE44377.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
SC9B2.02; transcriptional regulator
Displaying 23 items

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