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S24_scaffold_611_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_611_curated_1
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..2021
DNA (2019bp) protein (673aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000349D5C4 rbh
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYR65046.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
inner-membrane translocator
S24_scaffold_611_curated_2
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2018..2962
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000344BB54 rbh
ABC transporter permease {ECO:0000313|EMBL:EYR65047.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
inner-membrane translocator
S24_scaffold_611_curated_3
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3033..3986
DNA (954bp) protein (318aa)
iunH; inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.-) rbh
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B7J8_9MICO rbh
Ribonucleoside hydrolase {ECO:0000313|EMBL:EYR65048.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
S24_scaffold_611_curated_4
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3983..4930
DNA (948bp) protein (316aa)
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUY7_ACIC1 rbh
Nucleoside hydrolase {ECO:0000313|EMBL:EYR65049.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
S24_scaffold_611_curated_5
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4934..5911
DNA (978bp) protein (326aa)
rihA; pyrimidine-specific ribonucleoside hydrolase rihA (EC:3.2.2.8)
Pyrimidine-specific ribonucleoside hydrolase rihA n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RK69_BLASD
Nucleoside hydrolase {ECO:0000313|EMBL:EYR65050.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
S24_scaffold_611_curated_6
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5995..7029
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000346AF21 rbh
Nucleoside hydrolase {ECO:0000313|EMBL:EYR65051.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
inosine-uridine nucleoside N-ribohydrolase
S24_scaffold_611_curated_7
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7026..7835
DNA (810bp) protein (270aa)
oxidoreductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B322CB
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:EYR65052.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
short-chain dehydrogenase/reductase SDR
S24_scaffold_611_curated_8
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7915..8847
DNA (933bp) protein (311aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Frankia sp. QA3 RepID=I8QY35_9ACTO rbh
hypothetical protein rbh
S24_scaffold_611_curated_9
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8831..9802
DNA (972bp) protein (324aa)
UPI0003C7E8BF related cluster n=1 Tax=unknown RepID=UPI0003C7E8BF
Sugar kinase {ECO:0000313|EMBL:EYR65012.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
PfkB protein
S24_scaffold_611_curated_10
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9799..10836
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Nocardiopsis salina RepID=UPI0003453498
Nucleoside hydrolase {ECO:0000313|EMBL:EYR65013.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
inosine/uridine-preferring nucleoside hydrolase
S24_scaffold_611_curated_11
unknown

Not on your lists

11090..11260
DNA (171bp) protein (57aa)

This feature has no annotations

S24_scaffold_611_curated_12
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11257..11946
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA023-J06 RepID=UPI00036B759B
Cytochrome B6 {ECO:0000313|EMBL:KFF61024.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
cytochrome b/b6 domain-containing protein
S24_scaffold_611_curated_13
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11946..12935
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA023-J06 RepID=UPI00037C0373 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWT05551.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
S24_scaffold_611_curated_14
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13044..13421)
DNA (378bp) protein (126aa)
ArsR-family transcriptional regulator (Repressor) n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EVE6_MODMB
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGM13817.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
ArsR-family transcriptional regulator (repressor)
S24_scaffold_611_curated_15
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13609..14265
DNA (657bp) protein (219aa)
Type IV pilus assembly PilZ n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7H8_CELFA
Uncharacterized protein {ECO:0000313|EMBL:KGM00651.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
type IV pilus assembly PilZ
S24_scaffold_611_curated_16
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14269..17652)
DNA (3384bp) protein (1128aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCK9_CELFN rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM00649.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
S24_scaffold_611_curated_17
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17904..18407
DNA (504bp) protein (168aa)
DEAD/DEAH box helicase n=1 Tax=Glaciibacter superstes RepID=UPI0003B72270
Uncharacterized protein {ECO:0000313|EMBL:KGM00648.1}; Flags: Fragment;; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
ATP-dependent RNA helicase rhlE
Displaying 17 items

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