ggKbase home page

S24_scaffold_821_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_821_curated_1
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1..495)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000368BDA8
LacI family transcriptional regulator
Tax=BJP_IG2157_Actinomycetales_63_19
S24_scaffold_821_curated_2
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

678..1964
DNA (1287bp) protein (429aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Glycoside hydrolase family 10 n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H8I0_CELFA rbh
glycoside hydrolase family 10 rbh
S24_scaffold_821_curated_3
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1961..2572
DNA (612bp) protein (204aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACQ80965.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACQ80965.1};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Transcriptional regulator, LacI family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BY65_BEUC1
S24_scaffold_821_curated_4
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2629..3228)
DNA (600bp) protein (200aa)
Putative TetR family transcriptional regulator n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RHR4_FRAAA
TetR family transcriptional regulator
Mycofactocin system transcriptional regulator {ECO:0000313|EMBL:EIV91194.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
S24_scaffold_821_curated_5
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3305..4069
DNA (765bp) protein (255aa)
Putative levodione reductase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RDR4_LEIAQ rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EWT02458.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
putative short chain dehydrogenase/oxidoreductase rbh
S24_scaffold_821_curated_6
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4122..4952)
DNA (831bp) protein (277aa)
HAD family hydrolase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B7B0A1 rbh
HAD family hydrolase {ECO:0000313|EMBL:KGM01850.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
HAD family hydrolase
S24_scaffold_821_curated_7
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5071..5598
DNA (528bp) protein (176aa)
acetyltransferase n=1 Tax=Salinispora arenicola RepID=UPI0002F627BC
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABW00408.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
S24_scaffold_821_curated_8
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

5747..7339
DNA (1593bp) protein (531aa)
Putative uncharacterized protein n=1 Tax=Amycolatopsis mediterranei (strain S699) RepID=G0FN21_AMYMS rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Actinomycetales_70_11
S24_scaffold_821_curated_9
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7370..8308)
DNA (939bp) protein (313aa)
Auxin Efflux Carrier n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H147_CELFA rbh
Membrane protein {ECO:0000313|EMBL:KGM13500.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
auxin efflux carrier rbh
S24_scaffold_821_curated_10
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8540..9463)
DNA (924bp) protein (308aa)
ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B6336B rbh
binding-protein-dependent transport systems inner membrane component rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ31763.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
S24_scaffold_821_curated_11
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9463..10398)
DNA (936bp) protein (312aa)
ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B7A2A5 rbh
binding-protein-dependent transport systems inner membrane component rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ31764.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
S24_scaffold_821_curated_12
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10395..11537)
DNA (1143bp) protein (381aa)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4C721 rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ACZ31765.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
S24_scaffold_821_curated_13
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11540..12772)
DNA (1233bp) protein (411aa)
ABC transporter substrate-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B547BD rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGJ72258.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
ABC transporter substrate-binding protein rbh
S24_scaffold_821_curated_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12876..13916)
DNA (1041bp) protein (347aa)
Putative LacI-family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZR1_9ACTO rbh
putative LacI-family transcriptional regulator rbh
Putative LacI-family transcriptional regulator {ECO:0000313|EMBL:AGZ42379.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
S24_scaffold_821_curated_15
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14191..14460
DNA (270bp) protein (90aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W9X3_KINRD
Bifunctional D-altronate/D-mannonate dehydratase {ECO:0000313|EMBL:EWT04973.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
mandelate racemase/muconate lactonizing protein
Displaying 15 items

View Taxonomy