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S24_scaffold_425_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_425_curated_1
unknown

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2..442
DNA (441bp) protein (147aa)

This feature has no annotations

S24_scaffold_425_curated_2
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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573..1307
DNA (735bp) protein (245aa)
CAAX amino terminal protease family n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WZQ4_9PSEU rbh
Peptidase {ECO:0000313|EMBL:KGM17938.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein rbh
S24_scaffold_425_curated_3
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1413..2525)
DNA (1113bp) protein (371aa)
Methyltransferase type 11 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHC7_CELFN rbh
type 11 methyltransferase rbh
Methyltransferase type 11 {ECO:0000313|EMBL:ADG75248.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
S24_scaffold_425_curated_4
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2562..3557
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHC8_CELFN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG75249.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
S24_scaffold_425_curated_5
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3554..5728
DNA (2175bp) protein (725aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3E280 rbh
hypothetical protein
Tax=BJP_IG2157_Actinomycetales_63_19
S24_scaffold_425_curated_6
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5731..6675)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F521F1 rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADG75250.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
S24_scaffold_425_curated_7
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6809..7555)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H5K3_CELFA
Peptidase S9 {ECO:0000313|EMBL:KGM13365.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein
S24_scaffold_425_curated_8
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

8271..8531
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037B6C57
putative redox protein, regulator of disulfide bond formation
Tax=BJP_08E140C01_Actinomycetales_67_18
S24_scaffold_425_curated_9
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

8539..8964
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035DBD9C
coenzyme F420-reducing hydrogenase, delta subunit
Tax=BJP_08E140C01_Actinomycetales_67_18
S24_scaffold_425_curated_10
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8997..9476
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00037422FE
Uncharacterized protein {ECO:0000313|EMBL:KJS14256.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
hypothetical protein
S24_scaffold_425_curated_11
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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9523..12264
DNA (2742bp) protein (914aa)
glutamate synthase (EC:1.4.1.13) rbh
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000373A292 rbh
Tax=BJP_08E140C01_Actinomycetales_70_11
S24_scaffold_425_curated_12
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

12261..13988
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000375ED8C rbh
FAD binding protein rbh
Tax=BJP_08E140C01_Actinomycetales_70_11
S24_scaffold_425_curated_13
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13985..14236
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003763207
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
S24_scaffold_425_curated_14
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14233..15408
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000367A8AE rbh
4Fe-4S ferredoxin
Tax=BJP_08E140C01_Actinomycetales_70_11
S24_scaffold_425_curated_15
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15511..17199
DNA (1689bp) protein (563aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KGJ72056.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KGJ72056.1};; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
long-chain fatty acid--CoA ligase n=1 Tax=Glaciibacter superstes RepID=UPI0003B38DFD rbh
fatty-acid-CoA ligase
S24_scaffold_425_curated_16
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(17261..18010)
DNA (750bp) protein (250aa)
dienelactone hydrolase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262791D
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EWM18716.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
dienelactone hydrolase
S24_scaffold_425_curated_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18044..18781)
DNA (738bp) protein (246aa)
sulfate-transporting ATPase (EC:3.6.3.25) rbh
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEA24535.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEA24535.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Sulfate-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CST2_PSEUX rbh
S24_scaffold_425_curated_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18804..19757)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036CF3C5 rbh
cobalt ABC transporter inner membrane subunit CbiQ rbh
Cobalt ABC transporter, inner membrane subunit CbiQ {ECO:0000313|EMBL:AEA24536.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
S24_scaffold_425_curated_19
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19754..20854)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00038071D9 rbh
Cobalamin biosynthesis protein CbiM {ECO:0000313|EMBL:EPD67244.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
cobalamin (vitamin B12) biosynthesis protein CbiM rbh
S24_scaffold_425_curated_20
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

20939..21541
DNA (603bp) protein (201aa)
Ferric uptake regulator, Fur family n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E182_9MICO
ferric uptake regulator family protein
Tax=BJP_08E140C01_Actinomycetales_67_18
S24_scaffold_425_curated_21
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(21496..23076)
DNA (1581bp) protein (527aa)
Putative integral membrane multidrug-efflux transport protein (Partial) n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RRC7_FRAAA rbh
integral membrane multidrug-efflux transport protein rbh
Tax=RBG_16_Actinobacteria_68_21_curated
S24_scaffold_425_curated_22
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23108..23581)
DNA (474bp) protein (158aa)
Transcriptional regulator, MarR family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LW51_ACIC1
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABK53661.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
S24_scaffold_425_curated_23
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23614..24786)
DNA (1173bp) protein (391aa)
mannose-6-phosphate isomerase (EC:5.3.1.8) rbh
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI000361EDA9 rbh
Glycosyl transferase {ECO:0000313|EMBL:KGM16790.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
S24_scaffold_425_curated_24
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24871..25509
DNA (639bp) protein (213aa)
Glycosyl transferase group 1 n=1 Tax=Frankia sp. EUN1f RepID=D3D7W4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGM16789.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
phosphatidylinositol alpha-mannosyltransferase
Displaying 24 items

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