ggKbase home page

S24_scaffold_455_curated

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_455_curated_1
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61..1188)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7SNJ6_PROA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV90760.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
S24_scaffold_455_curated_2
Actinomyces johnsonii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1314..2054)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IVQ4_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:ERH14503.1}; TaxID=1227262 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces johnsonii F0510.;"
hypothetical protein
S24_scaffold_455_curated_3
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2277..3380
DNA (1104bp) protein (368aa)
Putative prophage phiRv2 integrase n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E5R1_9MICO rbh
Putative prophage phiRv2 integrase {ECO:0000313|EMBL:CCH71496.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
integrase rbh
S24_scaffold_455_curated_4
unknown

Not on your lists

3543..3848
DNA (306bp) protein (102aa)

This feature has no annotations

S24_scaffold_455_curated_5
unknown

Not on your lists

4108..4362
DNA (255bp) protein (85aa)

This feature has no annotations

S24_scaffold_455_curated_6
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4817..5032
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KHL18531.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
S24_scaffold_455_curated_7
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5109..5819
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YS54_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI44204.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
S24_scaffold_455_curated_8
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5816..6079
DNA (264bp) protein (88aa)
WhiB family transcriptional regulator {ECO:0000313|EMBL:EYR61997.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
S24_scaffold_455_curated_9
unknown

Not on your lists

6081..6758
DNA (678bp) protein (226aa)

This feature has no annotations

S24_scaffold_455_curated_10
unknown

Not on your lists

6859..7011
DNA (153bp) protein (51aa)

This feature has no annotations

S24_scaffold_455_curated_11
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7027..7683
DNA (657bp) protein (219aa)
Cassette chromosome recombinase B n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TM37_9MICO
Cassette chromosome recombinase B {ECO:0000313|EMBL:EAP99442.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
resolvase domain-containing protein-containing protein
S24_scaffold_455_curated_12
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7816..8313
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JT10_STREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW92945.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
S24_scaffold_455_curated_13
Actinoplanes phage phiAsp2, Caudovirales, Viruses

Not on your lists

8313..9875
DNA (1563bp) protein (521aa)
Pas60 n=1 Tax=Actinoplanes phage phiAsp2 RepID=Q6J7X1_9CAUD rbh
Pas60 {ECO:0000313|EMBL:AAT36808.1}; TaxID=279303 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Actinoplanes phage phiAsp2.;"
hypothetical protein
S24_scaffold_455_curated_14
unknown

Not on your lists

10342..11103
DNA (762bp) protein (254aa)

This feature has no annotations

S24_scaffold_455_curated_15
unknown

Not on your lists

11127..11678
DNA (552bp) protein (184aa)

This feature has no annotations

S24_scaffold_455_curated_16
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11680..13998
DNA (2319bp) protein (773aa)
Tail tape measure protein, TIGR01760 family n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F7W2_9ACTO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98335.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
S24_scaffold_455_curated_17
unknown

Not on your lists

comp(14170..14523)
DNA (354bp) protein (118aa)

This feature has no annotations

S24_scaffold_455_curated_trna_1
unknown

Not on your lists

comp(14932..15004)
DNA (73bp)
transferRNA Arg
S24_scaffold_455_curated_18
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15088..15747)
DNA (660bp) protein (220aa)
GntR domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7Y5_CELFA rbh
GntR domain-containing protein rbh
GntR domain protein {ECO:0000313|EMBL:AEE46946.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_455_curated_19
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15820..17169
DNA (1350bp) protein (450aa)
Major facilitator superfamily MFS_1 n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WBT7_KINRD rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS04276.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
S24_scaffold_455_curated_20
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17156..18838
DNA (1683bp) protein (561aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
arginyl-tRNA synthetase (EC:6.1.1.19) rbh
Arginine--tRNA ligase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7Y4_CELFA rbh
S24_scaffold_455_curated_21
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18835..20217
DNA (1383bp) protein (461aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
Diaminopimelate decarboxylase n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BCT2_SANKS rbh
diaminopimelate decarboxylase rbh
S24_scaffold_455_curated_22
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20391..21722
DNA (1332bp) protein (444aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Homoserine dehydrogenase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7Y1_CELFA rbh
homoserine dehydrogenase rbh
S24_scaffold_455_curated_23
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21722..22792
DNA (1071bp) protein (357aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
threonine synthase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F9D896 rbh
threonine synthase rbh
S24_scaffold_455_curated_24
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22810..23760
DNA (951bp) protein (317aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Homoserine kinase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7X9_CELFA rbh
homoserine kinase rbh
S24_scaffold_455_curated_25
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23974..24144
DNA (171bp) protein (57aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
Transcription termination factor Rho n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BCU1_SANKS
transcription termination factor Rho
Displaying 26 items

View Taxonomy