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S24_scaffold_555_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_555_curated_1
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1059)
DNA (1059bp) protein (353aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
Phosphomethylpyrimidine synthase n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3TKS1_9ACTO
phosphomethylpyrimidine synthase
S24_scaffold_555_curated_2
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1600..2340
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00037FEFEB
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AJC56635.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
S24_scaffold_555_curated_3
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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2375..3130
DNA (756bp) protein (252aa)
ion transporter n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B5A405
Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family
Tax=BJP_IG2157_Actinomycetales_63_19
S24_scaffold_555_curated_4
unknown

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comp(3155..3331)
DNA (177bp) protein (59aa)

This feature has no annotations

S24_scaffold_555_curated_5
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3808..6810)
DNA (3003bp) protein (1001aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037F7BB4 rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=BJP_IG2157_Actinomycetales_63_19
S24_scaffold_555_curated_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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7183..9870
DNA (2688bp) protein (896aa)
Putative diguanylate phosphodiesterase (EAL domain) with GAF sensor id=3858483 bin=GWC2_Chloroflexi_73_18 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_RIF_CHLX_72_14_curated
S24_scaffold_555_curated_7
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9881..11467)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H381_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:KHD74862.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
S24_scaffold_555_curated_8
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12445..12846)
DNA (402bp) protein (134aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FN25_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK44358.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
S24_scaffold_555_curated_9
Rhodococcus sp. Chr-9, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13232..14440)
DNA (1209bp) protein (403aa)
iscS3; Cysteine desulfurase (EC:2.8.1.7) rbh
Cysteine desulfurase family protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XDP7_9PSEU rbh
Cysteine desulfurase {ECO:0000313|EMBL:KHJ70491.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
S24_scaffold_555_curated_10
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(14437..14748)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A720_CELGA
Sulfurtransferase tusA {ECO:0000313|EMBL:KGM17940.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
S24_scaffold_555_curated_11
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(14739..15899)
DNA (1161bp) protein (387aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W3D8_9MICO
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EPR77215.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
S24_scaffold_555_curated_12
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(15899..16249)
DNA (351bp) protein (117aa)
DsrE family protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBZ7_INTC7
DsrE family protein
DsrE family protein {ECO:0000313|EMBL:ADU49537.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
S24_scaffold_555_curated_13
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(16326..17006)
DNA (681bp) protein (227aa)
Transcriptional regulator, ArsR family id=3862341 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ArsR family transcriptional regulator
Tax=GWB1_Spirochaetes_59_5_curated
S24_scaffold_555_curated_14
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17052..17522
DNA (471bp) protein (157aa)
membrane protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000377B612
UPF0060 membrane protein SNA_38180 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
hypothetical protein
S24_scaffold_555_curated_15
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17783..18961)
DNA (1179bp) protein (393aa)
MFS transporter n=1 Tax=Mycobacterium sp. 155 RepID=UPI000375DEC5 rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU48583.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
S24_scaffold_555_curated_16
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19409..20077
DNA (669bp) protein (223aa)
ArsR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625D22
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EGD43240.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
ArsR family transcriptional regulator
Displaying 16 items

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