ggKbase home page

S24_scaffold_326_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_326_curated_1
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..215
DNA (213bp) protein (71aa)
ABC transporter related protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8K7_INTC7
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADU49169.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
S24_scaffold_326_curated_2
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

212..1180
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8K8_INTC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU49170.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
S24_scaffold_326_curated_3
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1173..2144
DNA (972bp) protein (324aa)
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8K9_INTC7
multi-copper enzyme maturation ABC transporter permease-like protein
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein {ECO:0000313|EMBL:ADU49171.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
S24_scaffold_326_curated_4
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2141..2689
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8L0_INTC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU49172.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
S24_scaffold_326_curated_5
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2734..3414
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8L1_INTC7
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADU49173.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
S24_scaffold_326_curated_6
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3411..4376
DNA (966bp) protein (322aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8L2_INTC7 rbh
integral membrane sensor signal transduction histidine kinase rbh
S24_scaffold_326_curated_7
unknown

Not on your lists

4690..6048
DNA (1359bp) protein (453aa)

This feature has no annotations

S24_scaffold_326_curated_8
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6272..6802
DNA (531bp) protein (177aa)
Methyltransferase type 11 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M350_ACIFD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACU53444.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
S24_scaffold_326_curated_9
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6835..8046)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000368CE36 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWT07178.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein rbh
S24_scaffold_326_curated_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8623..9942
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003732D20 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU71086.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
S24_scaffold_326_curated_11
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10494..12590)
DNA (2097bp) protein (699aa)
NADH/ubiquinone/plastoquinone (Complex I) n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0S025_MYCXE rbh
NADH/ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:EID16728.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
hypothetical protein rbh
S24_scaffold_326_curated_12
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12590..13444)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI0003721EDF rbh
NADH ubiquinone oxidoreductase, 20 kDa subunit {ECO:0000313|EMBL:EID16729.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
putative NADH-ubiquinone oxidoreductase, 20kDa subunit
S24_scaffold_326_curated_13
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13445..14959)
DNA (1515bp) protein (505aa)
NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0S027_MYCXE rbh
NADH-ubiquinone oxidoreductase, chain 49kDa {ECO:0000313|EMBL:EID16730.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
NADH-ubiquinone oxidoreductase, chain 49kDa rbh
S24_scaffold_326_curated_14
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14956..16449)
DNA (1494bp) protein (498aa)
NADH dehydrogenase n=1 Tax=Humibacter albus RepID=UPI0003B6BD5C rbh
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:EID16731.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
NADH dehydrogenase (quinone) rbh
S24_scaffold_326_curated_15
Mycobacterium sp. TKK-01-0059, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16451..17149)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Mycobacterium yongonense 05-1390 RepID=S4ZI08_9MYCO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KEF98742.1}; TaxID=1324269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium sp. TKK-01-0059.;"
S24_scaffold_326_curated_16
Mycobacterium sp. TKK-01-0059, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17149..18108)
DNA (960bp) protein (320aa)
NADH dehydrogenase subunit 1 n=1 Tax=Humibacter albus RepID=UPI0003B36CBA rbh
respiratory-chain NADH dehydrogenase, subunit 1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEF98743.1}; TaxID=1324269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium sp. TKK-01-0059.;"
S24_scaffold_326_curated_17
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18526..19179
DNA (654bp) protein (218aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|RuleBase:RU004512}; EC=5.4.2.11 {ECO:0000256|RuleBase:RU004512};; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
phosphoglyceromutase n=1 Tax=Rhodococcus opacus RepID=UPI00029CCB30
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
S24_scaffold_326_curated_18
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19192..19437
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BYB9_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ31791.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
S24_scaffold_326_curated_19
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19695..20561
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003618CA2
Uncharacterized protein {ECO:0000313|EMBL:ERI38059.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
S24_scaffold_326_curated_20
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

20558..22126
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003740CF1 rbh
DNA mismatch repair protein MutS domain-containing protein rbh
Tax=CG_Anaero_02
S24_scaffold_326_curated_21
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22123..23673
DNA (1551bp) protein (517aa)
Putative DNA mismatch repair protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1H9_METPS rbh
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68119.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
MutS domain V
S24_scaffold_326_curated_22
Mycobacterium ulcerans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24206..25414)
DNA (1209bp) protein (403aa)
Manganese transport protein MntH n=1 Tax=Mycobacterium marinum str. Europe RepID=S7RJC5_MYCMR rbh
divalent cation-transport integral membrane protein rbh
Divalent cation-transport integral membrane protein {ECO:0000313|EMBL:ABL05387.1}; TaxID=362242 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium ulcerans (strain Agy99).;"
S24_scaffold_326_curated_23
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25745..26395)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BSY9_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ30831.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
S24_scaffold_326_curated_24
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26898..27236)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B5DC43
Uncharacterized protein {ECO:0000313|EMBL:KFI98969.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
S24_scaffold_326_curated_25
unknown

Not on your lists

comp(27233..27394)
DNA (162bp) protein (54aa)

This feature has no annotations

S24_scaffold_326_curated_26
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27494..28288)
DNA (795bp) protein (265aa)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V4_CELGA rbh
Diacylglyceryl transferase {ECO:0000313|EMBL:KGM10925.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
prolipoprotein diacylglyceryl transferase rbh
S24_scaffold_326_curated_27
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28595..28963
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00035C3D3C
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EWT07733.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
antibiotic biosynthesis monooxygenase
S24_scaffold_326_curated_28
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29095..29319
DNA (225bp) protein (75aa)
heavy metal transport/detoxification protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE634
heavy metal transport/detoxification protein
Copper chaperone (Modular protein) {ECO:0000313|EMBL:CCH87061.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
S24_scaffold_326_curated_29
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29442..29858)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE71_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG76547.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
S24_scaffold_326_curated_30
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30063..30821)
DNA (759bp) protein (253aa)
arginine ABC transporter ATP-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B6EC8E rbh
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ78358.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
ABC transporter-like protein rbh
Displaying items 1-30 of 32 in total

View Taxonomy