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S24_scaffold_365_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_365_curated_1
unknown

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3..185
DNA (183bp) protein (61aa)

This feature has no annotations

S24_scaffold_365_curated_2
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

779..994
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036BB13B
copper ion binding protein
Copper ion binding protein {ECO:0000313|EMBL:AEB42476.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
S24_scaffold_365_curated_3
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1103..3457
DNA (2355bp) protein (785aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGE9_NAKMY rbh
Carbonate dehydratase {ECO:0000313|EMBL:EYR62494.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
ATPase P rbh
S24_scaffold_365_curated_4
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3493..4236
DNA (744bp) protein (248aa)
NLP/P60 protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZF7_CELFA
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:AEE44878.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_365_curated_5
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4362..4532
DNA (171bp) protein (57aa)
DNA-directed DNA polymerase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H160_CELFA
3'-5' exonuclease {ECO:0000313|EMBL:KGM03760.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
DNA-directed DNA polymerase
S24_scaffold_365_curated_6
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4659..6914)
DNA (2256bp) protein (752aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6W1_CELFA
Fe-S oxidoreductase {ECO:0000313|EMBL:KGM01075.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
S24_scaffold_365_curated_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6989..8557)
DNA (1569bp) protein (523aa)
Copper-resistance protein, CopA family n=1 Tax=Rhodococcus equi ATCC 33707 RepID=E9SVR8_COREQ rbh
Copper oxidase {ECO:0000313|EMBL:AII11185.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
ferroxidase rbh
S24_scaffold_365_curated_8
Eimeria maxima, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(9589..10128)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000363C6BE
NADPH-dependent oxidoreductase, putative {ECO:0000313|EMBL:CDJ57458.1}; TaxID=5804 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria maxima (Coccidian parasite).;"
S24_scaffold_365_curated_9
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10238..10993)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZZ7_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44919.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_365_curated_10
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10990..11538)
DNA (549bp) protein (183aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZZ6_CELFA
Uncharacterized protein {ECO:0000313|EMBL:KGM01120.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
ECF subfamily RNA polymerase sigma-24 subunit
S24_scaffold_365_curated_11
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12177..13625
DNA (1449bp) protein (483aa)
Methanol dehydrogenase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYS1_CELFA rbh
Fibrillarin {ECO:0000313|EMBL:EYR63099.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
methanol dehydrogenase rbh
S24_scaffold_365_curated_12
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13699..14418
DNA (720bp) protein (240aa)
Phage shock protein A (IM30), suppresses sigma54-dependent transcription n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BD38_SANKS rbh
phage shock protein A (IM30), suppresses sigma54-dependent transcription rbh
Phage shock protein A (IM30), suppresses sigma54-dependent transcription {ECO:0000313|EMBL:ACZ23042.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
S24_scaffold_365_curated_13
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14508..15251
DNA (744bp) protein (248aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UJA6_CELFN
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADG73629.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
S24_scaffold_365_curated_14
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15282..16418)
DNA (1137bp) protein (379aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3) rbh
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LPQ5_9MICO rbh
S24_scaffold_365_curated_15
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16415..17095)
DNA (681bp) protein (227aa)
chemotaxis protein CheY n=1 Tax=Ruania albidiflava RepID=UPI0003B775A4 rbh
PhoR family transcriptional regulator {ECO:0000313|EMBL:KEP24439.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
winged helix family two component transcriptional regulator rbh
S24_scaffold_365_curated_16
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17314..17658
DNA (345bp) protein (115aa)
Glutaredoxin 2 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V0_CELGA
glutaredoxin 2
Glutaredoxin 2 {ECO:0000313|EMBL:AEI10667.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
S24_scaffold_365_curated_17
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17661..18632
DNA (972bp) protein (324aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SN99_NOCSJ rbh
cytochrome c biogenesis protein, transmembrane region rbh
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:ABL83284.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S24_scaffold_365_curated_18
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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18629..19267
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000376D8D8
redoxin
Tax=BJP_08E140C01_Actinomycetales_70_11
S24_scaffold_365_curated_19
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19561..20076
DNA (516bp) protein (172aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2T7_CELGA
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:AEI10654.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
S24_scaffold_365_curated_20
unknown

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20149..20964
DNA (816bp) protein (272aa)

This feature has no annotations

S24_scaffold_365_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21384..22031
DNA (648bp) protein (216aa)
Copper-containing nitrite reductase {ECO:0000313|EMBL:ADE28552.1}; EC=1.7.2.1 {ECO:0000313|EMBL:ADE28552.1};; Flags: Fragment;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGK2_9GAMM
putative multicopper oxidase
S24_scaffold_365_curated_22
unknown

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22066..22293
DNA (228bp) protein (76aa)

This feature has no annotations

S24_scaffold_365_curated_23
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22290..22943
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Mycobacterium RepID=A1UPY1_MYCSK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABL94889.1}; TaxID=189918 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain KMS).;"
S24_scaffold_365_curated_24
unknown

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comp(23395..23574)
DNA (180bp) protein (60aa)

This feature has no annotations

S24_scaffold_365_curated_25
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23642..25078)
DNA (1437bp) protein (479aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-) rbh
Prolipoprotein diacylglyceryl transferase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EUH2_MODMB rbh
Diacylglyceryl transferase {ECO:0000313|EMBL:EYR64507.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
S24_scaffold_365_curated_26
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25298..26149)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Rhodococcus sp. DK17 RepID=UPI000366E043 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR62183.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein rbh
S24_scaffold_365_curated_27
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(26241..28538)
DNA (2298bp) protein (766aa)
copper-exporting ATPase (EC:3.6.3.4) rbh
Probable copper-exporting ATPase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RV29_RHOSR rbh
ATPase P {ECO:0000313|EMBL:AII11307.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
Displaying 27 items

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