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S24_scaffold_381_curated

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_381_curated_1
unknown

Not on your lists

comp(3..110)
DNA (108bp) protein (36aa)

This feature has no annotations

S24_scaffold_381_curated_2
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(154..1323)
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBV4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO81334.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
S24_scaffold_381_curated_3
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1392..2105)
DNA (714bp) protein (238aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W6V1_9ACTO
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:ETJ06894.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
ABC transporter-like protein
S24_scaffold_381_curated_4
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2102..3187)
DNA (1086bp) protein (362aa)
Secretion protein HlyD family protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H362_CELFA
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AEE45283.1}; Flags: Precursor;; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_381_curated_5
unknown

Not on your lists

comp(3187..3594)
DNA (408bp) protein (136aa)

This feature has no annotations

S24_scaffold_381_curated_6
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3662..4006
DNA (345bp) protein (115aa)
Transcriptional regulator, PadR-like family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C0A0_BEUC1
Uncharacterized protein {ECO:0000313|EMBL:KHD75842.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PadR family transcriptional regulator
S24_scaffold_381_curated_7
unknown

Not on your lists

4003..4584
DNA (582bp) protein (194aa)

This feature has no annotations

S24_scaffold_381_curated_8
unknown

Not on your lists

comp(4808..5401)
DNA (594bp) protein (198aa)

This feature has no annotations

S24_scaffold_381_curated_9
unknown

Not on your lists

comp(5887..6315)
DNA (429bp) protein (143aa)

This feature has no annotations

S24_scaffold_381_curated_10
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6723..7862)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XSZ5_MICPN
Uncharacterized protein {ECO:0000313|EMBL:EWT00631.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
S24_scaffold_381_curated_11
unknown

Not on your lists

comp(7862..8155)
DNA (294bp) protein (98aa)

This feature has no annotations

S24_scaffold_381_curated_12
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8408..9310)
DNA (903bp) protein (301aa)
Glyoxalate/3-oxopropanoate/4-oxobutanoate reductase n=2 Tax=Geobacter sulfurreducens RepID=D7AIE5_GEOSK
ghr; glyoxalate/3-oxopropanoate/4-oxobutanoate reductase
Glyoxalate/3-oxopropanoate/4-oxobutanoate reductase {ECO:0000313|EMBL:AAR34748.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S24_scaffold_381_curated_13
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9307..9924)
DNA (618bp) protein (206aa)
Dihydroxyacetone kinase DhaL subunit n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLY2_NOCSJ
Dak phosphatase
Dak phosphatase {ECO:0000313|EMBL:AIE81935.1}; TaxID=59505 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii.;"
S24_scaffold_381_curated_14
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9937..10938)
DNA (1002bp) protein (334aa)
Dihydroxyacetone kinase {ECO:0000313|EMBL:EFU60782.1}; EC=2.7.1.29 {ECO:0000313|EMBL:EFU60782.1};; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 180 str. F0310.;"
Dihydroxyacetone kinase n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KT60_9ACTO rbh
dihydroxyacetone kinase
S24_scaffold_381_curated_15
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11087..11770)
DNA (684bp) protein (228aa)
Class II aldolase/adducin family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDQ6_NOCSJ
Aldolase {ECO:0000313|EMBL:EYR62287.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
class II aldolase/adducin family protein
S24_scaffold_381_curated_16
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11772..12656)
DNA (885bp) protein (295aa)
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDQ7_NOCSJ rbh
Autoinducer 2 aldolase {ECO:0000313|EMBL:EYR62286.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
aldolase rbh
S24_scaffold_381_curated_17
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12684..13070)
DNA (387bp) protein (129aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDQ8_NOCSJ
Polyketide synthase {ECO:0000313|EMBL:EYR62285.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
cupin
S24_scaffold_381_curated_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13085..15049)
DNA (1965bp) protein (655aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDQ9_NOCSJ rbh
short chain dehydrogenase rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABL79944.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S24_scaffold_381_curated_19
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15241..15957)
DNA (717bp) protein (239aa)
Transcriptional regulator, GntR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR0_NOCSJ rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR63411.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
GntR family transcriptional regulator rbh
S24_scaffold_381_curated_20
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16124..17161
DNA (1038bp) protein (346aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
translation initiation factor 2B subunit I (EC:5.3.1.23) rbh
Methylthioribose-1-phosphate isomerase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR1_NOCSJ rbh
S24_scaffold_381_curated_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17208..18317
DNA (1110bp) protein (370aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR2_NOCSJ rbh
putative sugar ABC transporter, substrate-binding protein rbh
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:ABL79947.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S24_scaffold_381_curated_22
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18407..19969
DNA (1563bp) protein (521aa)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR3_NOCSJ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR63408.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
ABC transporter-like protein rbh
S24_scaffold_381_curated_23
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19970..20998
DNA (1029bp) protein (343aa)
Monosaccharide ABC transporter membrane protein, CUT2 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR4_NOCSJ rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:EYR63407.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
inner-membrane translocator rbh
S24_scaffold_381_curated_24
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21023..22252
DNA (1230bp) protein (410aa)
Methylthioribose kinase {ECO:0000256|HAMAP-Rule:MF_01683}; Short=MTR kinase {ECO:0000256|HAMAP-Rule:MF_01683};; EC=2.7.1.100 {ECO:0000256|HAMAP-Rule:MF_01683};; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
mtnK; methylthioribose kinase (EC:2.7.1.100) rbh
Methylthioribose kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR5_NOCSJ rbh
S24_scaffold_381_curated_25
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22268..22690
DNA (423bp) protein (141aa)
RbsD or FucU transport n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C7T7_STRBB
Ribose ABC transporter {ECO:0000313|EMBL:EYR63405.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
transport protein RbsD/FucU
S24_scaffold_381_curated_trna_1
unknown

Not on your lists

comp(22917..22990)
DNA (74bp)
transferRNA Met
S24_scaffold_381_curated_26
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23056..25929)
DNA (2874bp) protein (958aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002D65423 rbh
UPF0182 protein Q760_16265 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein rbh
S24_scaffold_381_curated_27
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26137..26721
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHM9_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG75350.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
S24_scaffold_381_curated_28
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26714..27859)
DNA (1146bp) protein (382aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H393_CELFA rbh
PDZ/DHR/GLGF domain-containing protein rbh
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:AEE45314.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Displaying 29 items

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