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S24_scaffold_624_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_624_curated_1
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..2782
DNA (2781bp) protein (927aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2H8_CELFA rbh
ECF subfamily RNA polymerase sigma-24 subunit rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE47598.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_624_curated_2
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2754..4472)
DNA (1719bp) protein (573aa)
diguanylate kinase (EC:2.7.7.65)
Diguanylate kinase {ECO:0000313|EMBL:CCH86306.1}; EC=2.7.7.65 {ECO:0000313|EMBL:CCH86306.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Diguanylate kinase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ESE3_MODMB
S24_scaffold_624_curated_3
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4579..5271)
DNA (693bp) protein (231aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1) rbh
Ribonucleoside-diphosphate reductase subunit beta id=2793733 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
S24_scaffold_624_curated_4
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5317..5574)
DNA (258bp) protein (86aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNA1_LEIAQ
S24_scaffold_624_curated_5
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5626..8679)
DNA (3054bp) protein (1018aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
nrdA; ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1) rbh
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI00036EE0E6 rbh
S24_scaffold_624_curated_6
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9338..9973)
DNA (636bp) protein (212aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Uracil phosphoribosyltransferase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5W0_CELGA rbh
uracil phosphoribosyltransferase rbh
S24_scaffold_624_curated_7
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10037..10501
DNA (465bp) protein (155aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5V9_CELGA
CMP/dCMP deaminase zinc-binding protein
S24_scaffold_624_curated_8
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10626..11609)
DNA (984bp) protein (328aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
NAD-dependent protein deacetylase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5V8_CELGA rbh
Silent information regulator protein Sir2 rbh
S24_scaffold_624_curated_trna_1
unknown

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11676..11762
DNA (87bp)
transferRNA Ser
S24_scaffold_624_curated_9
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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12600..12971
DNA (372bp) protein (124aa)
glyoxalase n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036C28BD
Glyoxalase {ECO:0000313|EMBL:EYT54693.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
glyoxalase/bleomycin resistance protein/dioxygenase
S24_scaffold_624_curated_10
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13140..14027
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBY4_CELFN rbh
Restriction endonuclease {ECO:0000313|EMBL:KGM13412.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein rbh
S24_scaffold_624_curated_11
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(14088..14579)
DNA (492bp) protein (164aa)
TetR family transcriptional regulator n=1 Tax=Amycolatopsis methanolica RepID=UPI000381A0B9
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIJ24478.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
S24_scaffold_624_curated_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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14754..15998
DNA (1245bp) protein (415aa)
Multidrug resistance protein mdtL n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VT85_9ACTO rbh
Multidrug resistance protein mdtL rbh
Multidrug resistance protein mdtL {ECO:0000313|EMBL:AGZ38871.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
S24_scaffold_624_curated_13
unknown

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16377..18044
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H5Y4_9FIRM
Displaying 14 items

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