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S24_scaffold_655_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_655_curated_1
unknown

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3..155
DNA (153bp) protein (51aa)

This feature has no annotations

S24_scaffold_655_curated_2
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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229..1101
DNA (873bp) protein (291aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Actinoplanes globisporus RepID=UPI000372FA32 rbh
FAH family protein {ECO:0000313|EMBL:ELP62026.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase rbh
S24_scaffold_655_curated_3
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1101..2123
DNA (1023bp) protein (341aa)
Putative alcohol dehydrogenase n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8PMN8_STRVR rbh
Putative alcohol dehydrogenase {ECO:0000313|EMBL:ELS58866.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
dehydrogenase rbh
S24_scaffold_655_curated_4
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2120..2938
DNA (819bp) protein (273aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7ET11_9ACTO rbh
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:ELP62029.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
IclR family transcriptional regulator rbh
S24_scaffold_655_curated_5
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3027..5129)
DNA (2103bp) protein (701aa)
Putative Beta-galactosidase BgaA n=1 Tax=Streptomyces afghaniensis 772 RepID=S4N339_9ACTO rbh
Beta-galactosidase {ECO:0000313|EMBL:KJC63071.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
bga19; putative beta-galactosidase rbh
S24_scaffold_655_curated_6
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5167..6111)
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H0P9_CELFA rbh
binding-protein-dependent transport systems inner membrane component rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEE45022.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_655_curated_7
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6108..7052)
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H0P8_CELFA rbh
binding-protein-dependent transport systems inner membrane component rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEE45021.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_655_curated_8
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7174..8529)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI0003681027 rbh
family 1 extracellular solute-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEE45020.1}; Flags: Precursor;; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_655_curated_9
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8604..9647)
DNA (1044bp) protein (348aa)
Transcriptional regulator n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BDP0_SANKS rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:ACZ21102.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
S24_scaffold_655_curated_10
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9896..10951)
DNA (1056bp) protein (352aa)
Auxin Efflux Carrier n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F333_SPICH
Uncharacterized protein {ECO:0000313|EMBL:KGM14753.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
auxin efflux carrier
S24_scaffold_655_curated_11
unknown

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comp(11083..11556)
DNA (474bp) protein (158aa)

This feature has no annotations

S24_scaffold_655_curated_12
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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11694..12608
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TDS8_AMYOR
Uncharacterized protein {ECO:0000313|EMBL:KEP23763.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
hypothetical protein
S24_scaffold_655_curated_13
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(12549..13220)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T4T5_MICAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL45796.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
S24_scaffold_655_curated_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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13358..13678
DNA (321bp) protein (107aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE02_NAKMY
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ACV79705.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
S24_scaffold_655_curated_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13762..15981)
DNA (2220bp) protein (740aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Catalase-peroxidase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGA8_NAKMY rbh
catalase/peroxidase HPI rbh
S24_scaffold_655_curated_16
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(16011..16547)
DNA (537bp) protein (179aa)
Fur family transcriptional regulator n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037B4BCD
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65838.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
transcription regulator FurA
S24_scaffold_655_curated_17
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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16734..17285
DNA (552bp) protein (184aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UJL0_CELFN
Uncharacterized protein {ECO:0000313|EMBL:KGM00659.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
ECF subfamily RNA polymerase sigma-24 subunit
S24_scaffold_655_curated_18
unknown

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17282..17401
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 18 items

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