ggKbase home page

S24_scaffold_199_curated_14

Organism: S24_Micrococcoles_71_12_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 13329..13775

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SIU0_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 137.0
  • Bit_score: 97
  • Evalue 1.10e-17
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCH75936.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 138.0
  • Bit_score: 125
  • Evalue 5.40e-26
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 137.0
  • Bit_score: 97
  • Evalue 3.20e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGGAGACCGCACCCGCGATCGACGGCGCTGCACTTCGCGCCGCGCGGATCCGTGCTGGGCTGACGCAGCACGAGCTGGCGCATGAGGTCGGGGTGGTGGGCGGGGAGCGTGTCTCGATGTGGGAGCGTGGCGAGGCTCGGCCCCGTAGCCCGCACCTGCTGCAAGCGGTGGCGCGTGCCGTGGCCGTGCCGGTAACCGCCCTGCTCCTTGAGCCCGACGGGGGCACGAGCCTGCGATGGCTCCGGTTCGCGGCGGGCCTCAGTGTGGATGAGGTCGCCCGCGCCGCCCACGTGTCCGTCGCCTCGCTGAAGCGTTGGGAGGCGCAGGGGTGTCGGCGAATGCCCTCCCCGGCGACTCTCAACGCGGTGGCGGCAGCGTTGGGCGTCGCGTCGGCCGAGGTCGAGAGCGCACTGCACCCGAAGTCAGGAGCCGTGTCCACAGCGTGA
PROTEIN sequence
Length: 149
METAPAIDGAALRAARIRAGLTQHELAHEVGVVGGERVSMWERGEARPRSPHLLQAVARAVAVPVTALLLEPDGGTSLRWLRFAAGLSVDEVARAAHVSVASLKRWEAQGCRRMPSPATLNAVAAALGVASAEVESALHPKSGAVSTA*