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S24_scaffold_199_curated

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_199_curated_1
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..278)
DNA (276bp) protein (92aa)
transcriptional regulator n=1 Tax=Ruania albidiflava RepID=UPI0003B33EB8
Transcriptional regulator {ECO:0000313|EMBL:KGM11443.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
S24_scaffold_199_curated_2
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1414..2388)
DNA (975bp) protein (325aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHD5_CELFN rbh
NAD-dependent epimerase/dehydratase rbh
S24_scaffold_199_curated_3
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2392..3390)
DNA (999bp) protein (333aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHD6_CELFN rbh
GDP-mannose 4,6-dehydratase rbh
S24_scaffold_199_curated_4
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3457..5142)
DNA (1686bp) protein (562aa)
major facilitator transporter n=1 Tax=Streptomyces RepID=UPI0003760891 rbh
Permease {ECO:0000313|EMBL:EOM74269.1}; TaxID=1273125 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
putative transporter rbh
S24_scaffold_199_curated_5
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5563..5874
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM12811.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
S24_scaffold_199_curated_6
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6177..6410
DNA (234bp) protein (78aa)
Putative integral membrane protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RFZ8_CLAMS
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:CAQ01135.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
S24_scaffold_199_curated_7
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6575..7252
DNA (678bp) protein (226aa)
hemolysin III n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B58A31 rbh
Hemolysin III {ECO:0000313|EMBL:KGM14847.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
Hly-III family protein rbh
S24_scaffold_199_curated_8
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7327..7683
DNA (357bp) protein (119aa)
Putative PadR family transcriptional regulator n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UQ20_9MICO
Putative PadR family transcriptional regulator {ECO:0000313|EMBL:GAB47825.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
PadR-like family transcriptional regulator
S24_scaffold_199_curated_9
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7702..8418
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UQ21_9MICO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB47826.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
hypothetical protein
S24_scaffold_199_curated_10
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8546..8953
DNA (408bp) protein (136aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2S5_CELFA
transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:AEE46424.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S24_scaffold_199_curated_11
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9052..9774)
DNA (723bp) protein (241aa)
peroxiredoxin (EC:1.11.1.15) rbh
Peroxiredoxin {ECO:0000313|EMBL:AFM16275.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AFM16275.1};; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
Peroxiredoxin n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BG68_MYCCN rbh
S24_scaffold_199_curated_12
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9987..11240)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A769_CELGA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI13556.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
S24_scaffold_199_curated_13
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists

comp(11860..13047)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QQY5_PERMH
hypothetical protein
Tax=RIFOXYD1_FULL_OD1_46_19_curated
S24_scaffold_199_curated_14
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13329..13775
DNA (447bp) protein (149aa)
Helix-turn-helix domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SIU0_NOCSJ
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCH75936.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
helix-turn-helix domain-containing protein
S24_scaffold_199_curated_15
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14019..14642
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RP55_BLASD
Uncharacterized protein {ECO:0000313|EMBL:CCH72756.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
hypothetical protein
S24_scaffold_199_curated_16
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14630..15502
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0W1_XYLCX
Uncharacterized protein {ECO:0000313|EMBL:CCH72755.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
hypothetical protein
S24_scaffold_199_curated_17
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15526..16242
DNA (717bp) protein (239aa)
SAF domain protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0V0_XYLCX
Uncharacterized protein {ECO:0000313|EMBL:KGN41903.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
SAF domain-containing protein
S24_scaffold_199_curated_18
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16239..17072
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJV2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAP98657.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
S24_scaffold_199_curated_19
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17069..18679
DNA (1611bp) protein (537aa)
Type II secretion system protein E n=1 Tax=Nocardioides sp. CF8 RepID=R7XWH1_9ACTO rbh
Secretion system protein E {ECO:0000313|EMBL:EWT06789.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
type II secretion system protein E rbh
S24_scaffold_199_curated_20
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18667..19545
DNA (879bp) protein (293aa)
Putative integral membrane protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJV4_9MICO rbh
Putative integral membrane protein {ECO:0000313|EMBL:EAP98659.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
type II secretion system protein
S24_scaffold_199_curated_21
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19542..20444
DNA (903bp) protein (301aa)
Putative integral membrane protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9US60_9ACTO rbh
Type II secretion protein F {ECO:0000313|EMBL:EWT06791.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
type II secretion system protein
S24_scaffold_199_curated_22
unknown

Not on your lists

20481..20684
DNA (204bp) protein (68aa)

This feature has no annotations

S24_scaffold_199_curated_23
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20711..21118
DNA (408bp) protein (136aa)
Putative membrane protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9US62_9ACTO
TadE family protein {ECO:0000313|EMBL:CCH75950.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
TadE family protein
S24_scaffold_199_curated_24
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21115..21570
DNA (456bp) protein (152aa)
TadE family protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0V7_XYLCX
Putative membrane protein {ECO:0000313|EMBL:CCH75951.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
TadE family protein
S24_scaffold_199_curated_25
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21576..22025
DNA (450bp) protein (150aa)
TadE family protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0V8_XYLCX
Uncharacterized protein {ECO:0000313|EMBL:CCH75952.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
TadE family protein
S24_scaffold_199_curated_26
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22022..25234
DNA (3213bp) protein (1071aa)
Putative membrane protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJW0_9MICO rbh
Putative membrane protein {ECO:0000313|EMBL:CCH75953.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
peptidoglycan-binding LysM rbh
S24_scaffold_199_curated_27
unknown

Not on your lists

25300..25929
DNA (630bp) protein (210aa)

This feature has no annotations

S24_scaffold_199_curated_28
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26103..26480
DNA (378bp) protein (126aa)
Transcriptional regulator, ArsR family n=1 Tax=Micrococcus luteus SK58 RepID=D3LL25_MICLU
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EZP40286.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
transcriptional regulator, ArsR family
S24_scaffold_199_curated_29
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26482..27393
DNA (912bp) protein (304aa)
Cation diffusion facilitator family transporter n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A3J8_CELGA rbh
Cation transporter {ECO:0000313|EMBL:KGM12751.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
cation diffusion facilitator family transporter rbh
S24_scaffold_199_curated_30
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27520..27897
DNA (378bp) protein (126aa)
Transcriptional regulator, ArsR family n=1 Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NGD5_KYTSD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACV07544.1}; TaxID=478801 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;"
Displaying items 1-30 of 54 in total

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