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S24_scaffold_1713_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_1713_curated_1
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3..155)
DNA (153bp) protein (51aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
ABC transporter related n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQP3_9FIRM
ABC-type cobalt transport system, ATPase component
S24_scaffold_1713_curated_2
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(146..970)
DNA (825bp) protein (275aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
cobalt ABC transporter, ATPase subunit (EC:3.6.3.31)
Cobalt ABC transporter, ATPase subunit n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQP2_9FIRM rbh
S24_scaffold_1713_curated_3
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(1246..1584)
DNA (339bp) protein (113aa)
50S ribosomal protein L17 n=1 Tax=Acetonema longum DSM 6540 RepID=F7NF68_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
50S ribosomal protein L17
S24_scaffold_1713_curated_4
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1602..2561)
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQP0_9FIRM rbh
DNA-directed RNA polymerase subunit alpha
S24_scaffold_1713_curated_5
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(2624..3256)
DNA (633bp) protein (211aa)
30S ribosomal protein S4 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN9_9FIRM rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
ribosomal protein S4
S24_scaffold_1713_curated_6
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(3281..3676)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN8_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
rpsK; 30S ribosomal protein S11
S24_scaffold_1713_curated_7
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(3689..4063)
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=1 Tax=Acetonema longum DSM 6540 RepID=F7NF72_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
Ribosomal protein S13
S24_scaffold_1713_curated_8
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4078..4191)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BZU8_9BACL
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
rpmJ; 50S ribosomal protein L36
S24_scaffold_1713_curated_9
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4218..4436)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN5_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Translation initiation factor IF-1
S24_scaffold_1713_curated_10
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4418..4735)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00036562A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ29197.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
S24_scaffold_1713_curated_11
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4748..5494)
DNA (747bp) protein (249aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN3_9FIRM rbh
S24_scaffold_1713_curated_12
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5491..6144)
DNA (654bp) protein (218aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
Adenylate kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN2_9FIRM rbh
Adenylate kinase
S24_scaffold_1713_curated_13
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(6158..6685)
DNA (528bp) protein (176aa)
Protein translocase subunit SecY n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN1_9FIRM rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
Protein translocase subunit SecY
S24_scaffold_1713_curated_14
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(7415..7567)
DNA (153bp) protein (51aa)
50S ribosomal protein L15 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN0_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
ribosomal protein L15
Displaying 14 items

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