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S24_scaffold_2656_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_2656_curated_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..259)
DNA (258bp) protein (86aa)
Transketolase central region id=1265233 bin=GWE1_Burkholderiales_65_30 species=Novosphingobium pentaromativorans genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
pyruvate dehydrogenase
Tax=BJP_08E140C01_Burkholderiales_65_30
S24_scaffold_2656_curated_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(256..678)
DNA (423bp) protein (141aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] id=5081221 bin=GWF1_Burkholderiales_GWF1_66_17 species=Novosphingobium pentaromativorans genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
pyruvate dehydrogenase
Tax=BJP_08E140C01_Burkholderiales_65_30
S24_scaffold_2656_curated_3
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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788..1033
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X7A4_THEPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG82474.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
S24_scaffold_2656_curated_4
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1191..3632
DNA (2442bp) protein (814aa)
ATP-dependent protease n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HME2_9FIRM rbh
ATP-dependent protease {ECO:0000313|EMBL:EAX48982.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
peptidase S16 lon domain protein
S24_scaffold_2656_curated_5
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3629..5002
DNA (1374bp) protein (458aa)
RNA methyltransferase, TrmA family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HME1_9FIRM rbh
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:EAX48981.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
RNA methyltransferase, TrmA family
S24_scaffold_2656_curated_6
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

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5395..5832
DNA (438bp) protein (146aa)
Mn-containing catalase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KK76_9FIRM
Bacterioferritin {ECO:0000313|EMBL:KJS13999.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
Mn-containing catalase
S24_scaffold_2656_curated_7
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5909..7288)
DNA (1380bp) protein (460aa)
Periplasmic [NiFeSe] hydrogenase large subunit {ECO:0000313|EMBL:EQB25819.1}; EC=1.12.99.6 {ECO:0000313|EMBL:EQB25819.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Periplasmic [NiFeSe] hydrogenase large subunit n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JNH0_9FIRM rbh
Ni,Fe-hydrogenase I large subunit rbh
S24_scaffold_2656_curated_8
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7285..8250)
DNA (966bp) protein (322aa)
Periplasmic [NiFeSe] hydrogenase small subunit {ECO:0000313|EMBL:EQB25818.1}; EC=1.12.99.6 {ECO:0000313|EMBL:EQB25818.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6) rbh
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI00036A89A0 rbh
S24_scaffold_2656_curated_9
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8807..9496
DNA (690bp) protein (230aa)
Integral membrane protein TerC n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQY4_9FIRM
integral membrane protein, YjbE family
Integral membrane protein, YjbE family {ECO:0000313|EMBL:AIF52316.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
S24_scaffold_2656_curated_10
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9497..10087
DNA (591bp) protein (197aa)
Uncharacterized protein n=5 Tax=Pelosinus fermentans RepID=I8RNY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EIW16362.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
hypothetical protein
Displaying 10 items

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