ggKbase home page

S24_scaffold_1115_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_1115_curated_1
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(68..1708)
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00035D3CF4 rbh
Membrane protein {ECO:0000313|EMBL:KHM53232.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
hypothetical protein rbh
S24_scaffold_1115_curated_2
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2213..2725
DNA (513bp) protein (171aa)
Radical SAM domain containing protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JS92_9FIRM
Radical SAM domain containing protein {ECO:0000313|EMBL:EQB25168.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
radical SAM domain-containing protein
S24_scaffold_1115_curated_3
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2868..3776
DNA (909bp) protein (303aa)
transcriptional regulator n=1 Tax=Clostridium tunisiense RepID=UPI0002D81853 rbh
Transcriptional regulator {ECO:0000313|EMBL:EQB89229.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
transcriptional regulator, AraC family
S24_scaffold_1115_curated_4
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(3842..6481)
DNA (2640bp) protein (880aa)
Diguanylate cyclase (GGDEF) domain protein n=2 Tax=Clostridium carboxidivorans P7 RepID=D6MA84_9CLOT rbh
diguanylate cyclase rbh
Diguanylate cyclase (GGDEF) domain-containing protein,uncharacterized domain HDIG-containing protein {ECO:0000313|EMBL:AFK07896.1}; Flags: Precursor;; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
S24_scaffold_1115_curated_5
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6805..7353
DNA (549bp) protein (183aa)
Cytosine/adenosine deaminase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LTR8_CLOCD
cytosine/adenosine deaminase
Cytosine/adenosine deaminase {ECO:0000313|EMBL:AEV70578.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
S24_scaffold_1115_curated_6
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7453..8070
DNA (618bp) protein (206aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IQ07_9FIRM
S24_scaffold_1115_curated_7
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8153..8782
DNA (630bp) protein (210aa)
SNARE associated protein n=5 Tax=Pelosinus fermentans RepID=I8RJZ8_9FIRM
SNARE associated protein {ECO:0000313|EMBL:EIW19799.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
SNARE associated protein
S24_scaffold_1115_curated_8
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9171..10967
DNA (1797bp) protein (599aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
pyruvate ferredoxin/flavodoxin oxidoreductase (EC:1.2.1.51)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NJ87_9FIRM rbh
Displaying 8 items

View Taxonomy