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S24_scaffold_1884_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_1884_curated_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..165)
DNA (165bp) protein (55aa)
Starvation-sensing protein RspB n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3J597_ENTCL
L-iditol 2-dehydrogenase {ECO:0000313|EMBL:KIC94011.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
rspB; starvation-sensing protein RspB
S24_scaffold_1884_curated_2
unknown

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405..1163
DNA (759bp) protein (253aa)

This feature has no annotations

S24_scaffold_1884_curated_3
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1227..1805)
DNA (579bp) protein (193aa)
inhA; isonitrile hydratase (EC:4.2.1.103)
AraC family transcriptional regulator n=1 Tax=Acetonema longum DSM 6540 RepID=F7NJN7_9FIRM
AraC family transcriptional regulator {ECO:0000313|EMBL:EGO63741.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
S24_scaffold_1884_curated_4
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1850..2506)
DNA (657bp) protein (219aa)
hydrogenase, Fe-only (EC:1.12.7.2)
Hydrogenase subunit HymC n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JXY3_9FIRM
Hydrogenase subunit HymC {ECO:0000313|EMBL:EQB26798.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
S24_scaffold_1884_curated_5
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2503..4542)
DNA (2040bp) protein (680aa)
NADP-reducing hydrogenase subunit HndC {ECO:0000313|EMBL:EQB26799.1}; EC=1.12.1.3 {ECO:0000313|EMBL:EQB26799.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
NADP-reducing hydrogenase subunit HndC n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JRC2_9FIRM rbh
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
S24_scaffold_1884_curated_6
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4526..5005)
DNA (480bp) protein (160aa)
NADP-reducing hydrogenase subunit HndA {ECO:0000313|EMBL:EQB26800.1}; EC=1.12.1.3 {ECO:0000313|EMBL:EQB26800.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
fhbA; FhbA (EC:1.6.5.3)
NADP-reducing hydrogenase subunit HndA n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0ID36_9FIRM
S24_scaffold_1884_curated_7
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5209..6456)
DNA (1248bp) protein (416aa)
S-layer domain protein domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRI2_9FIRM
S-layer domain protein domain protein {ECO:0000313|EMBL:EAX47313.1}; Flags: Precursor;; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
S-layer protein
S24_scaffold_1884_curated_8
unknown

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comp(6550..7278)
DNA (729bp) protein (243aa)

This feature has no annotations

S24_scaffold_1884_curated_9
GWC2_OP9X_49_35_curated, OP9X, Bacteria

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comp(7287..8858)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Histophilus somni (strain 129Pt) RepID=Q0I519_HISS1 rbh
permease rbh
Tax=GWC2_OP9X_49_35_curated
S24_scaffold_1884_curated_10
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

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comp(8860..9333)
DNA (474bp) protein (158aa)
adenylate cyclase id=44857 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
adenylate cyclase
Tax=BJP_IG2103_ACD39_50_23
S24_scaffold_1884_curated_11
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9347..9928)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TM96_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR47314.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
S24_scaffold_1884_curated_12
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10211..10795)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TM96_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR47314.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
S24_scaffold_1884_curated_13
Yersinia frederiksenii, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10900..11811)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Yersinia frederiksenii ATCC 33641 RepID=C4SSJ1_YERFR
Uncharacterized protein {ECO:0000313|EMBL:KGA47336.1}; TaxID=349966 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia frederiksenii ATCC 33641.;"
S24_scaffold_1884_curated_14
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11871..12542)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000372C658
phosphate transport regulator related to PhoU
Phosphate transport regulator related to PhoU {ECO:0000313|EMBL:AGK98567.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
S24_scaffold_1884_curated_15
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(12542..13126)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000373AF42
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:AIF52733.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
Displaying 15 items

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