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S24_scaffold_1176_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_1176_curated_1
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..829
DNA (828bp) protein (276aa)
Hydrogenase, Fe-only n=1 Tax=Acetonema longum DSM 6540 RepID=F7NFG0_9FIRM
Hydrogenase, Fe-only {ECO:0000313|EMBL:EGO65215.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
uptake hydrogenase
S24_scaffold_1176_curated_2
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

837..1109
DNA (273bp) protein (91aa)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit n=1 Tax=Acetonema longum DSM 6540 RepID=F7NFG1_9FIRM
NADH dehydrogenase (Ubiquinone) 24 kDa subunit {ECO:0000313|EMBL:EGO65216.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
S24_scaffold_1176_curated_3
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1187..1864)
DNA (678bp) protein (226aa)
Cytochrome b subunit of formate dehydrogenase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JVL0_9FIRM
Cytochrome b subunit of formate dehydrogenase {ECO:0000313|EMBL:EQB26333.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
formate dehydrogenase
S24_scaffold_1176_curated_4
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1864..2184)
DNA (321bp) protein (107aa)
Putative periplasmic [Fe] hydrogenase small subunit {ECO:0000313|EMBL:EQB26334.1}; EC=1.12.7.2 {ECO:0000313|EMBL:EQB26334.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hydB; putative periplasmic [Fe] hydrogenase small subunit (EC:1.12.7.2)
Putative periplasmic [Fe] hydrogenase small subunit n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JQ06_9FIRM
S24_scaffold_1176_curated_5
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2197..3459)
DNA (1263bp) protein (421aa)
Periplasmic [Fe] hydrogenase large subunit {ECO:0000313|EMBL:EQB26335.1}; EC=1.12.7.2 {ECO:0000313|EMBL:EQB26335.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hydA; putative periplasmic [Fe] hydrogenase large subunit (EC:1.12.7.2) rbh
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI0003661D3A rbh
S24_scaffold_1176_curated_6
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3826..4164
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000361A269
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
anti-sigma-factor antagonist
S24_scaffold_1176_curated_7
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

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4161..4580
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037DC24A
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:EFQ22499.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12260.;"
anti-sigma regulatory factor, serine/threonine protein kinase
S24_scaffold_1176_curated_8
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4567..5565
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000376E73C rbh
NMT1/THI5 like domain-containing protein {ECO:0000313|EMBL:EMS81551.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
S24_scaffold_1176_curated_9
unknown

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comp(5534..6238)
DNA (705bp) protein (235aa)

This feature has no annotations

S24_scaffold_1176_curated_10
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6431..7486
DNA (1056bp) protein (352aa)
Serine phosphatase RsbU, regulator of sigma subunit n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1P3_9GAMM rbh
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:EIC21488.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
protein serine/threonine phosphatase with Cache sensor rbh
S24_scaffold_1176_curated_11
unknown

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7772..8092
DNA (321bp) protein (107aa)

This feature has no annotations

S24_scaffold_1176_curated_12
unknown

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8099..8200
DNA (102bp) protein (34aa)

This feature has no annotations

S24_scaffold_1176_curated_13
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8304..8765)
DNA (462bp) protein (154aa)
C_GCAxxG_C_C family protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AT14_PELPD
C_GCAxxG_C_C family protein
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:ABL00485.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
S24_scaffold_1176_curated_14
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9077..10453
DNA (1377bp) protein (459aa)
UPF0061 protein HMPREF0083_01523 n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WP79_ANEAE rbh
UPF0061 protein HMPREF0083_01523 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
hypothetical protein
S24_scaffold_1176_curated_15
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10570..10992
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0K2Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB28423.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hypothetical protein
S24_scaffold_1176_curated_16
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10997..11761)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00036EF9B3
Ion transport protein
Ion transport protein {ECO:0000313|EMBL:ADI13701.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
S24_scaffold_1176_curated_17
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11958..12794
DNA (837bp) protein (279aa)
Alpha/beta hydrolase fold protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXN7_KYRT2
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADG05958.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
S24_scaffold_1176_curated_18
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12959..14818
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Brevibacillus laterosporus RepID=UPI0003713844 rbh
RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:AKF94825.1}; TaxID=1465 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus (Bacillus laterosporus).;"
putative sigma-54 interacting protein rbh
S24_scaffold_1176_curated_19
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15039..16265
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NES4_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGO65485.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
hypothetical protein rbh
S24_scaffold_1176_curated_20
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16270..16464
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Succinispira mobilis RepID=UPI00035E4738
TIM-barrel signal transduction protein {ECO:0000313|EMBL:EGO65486.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
TIM-barrel signal transduction protein
Displaying 20 items

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