ggKbase home page

S24_scaffold_1164_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S24_scaffold_1164_curated_1
unknown

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)

This feature has no annotations

S24_scaffold_1164_curated_2
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(121..768)
DNA (648bp) protein (216aa)
butyryl-CoA:acetoacetate CoA-transferase subunit alpha (EC:2.8.3.9 2.8.3.8)
3-oxoacid CoA-transferase, A subunit n=5 Tax=Pelosinus fermentans RepID=I8RBP3_9FIRM
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:EIW16458.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
S24_scaffold_1164_curated_3
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(822..1757)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NVB1_9FIRM
protein of unknown function DUF849
Uncharacterized protein {ECO:0000313|EMBL:AJQ29121.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
S24_scaffold_1164_curated_4
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1785..3185)
DNA (1401bp) protein (467aa)
Short chain fatty acid transporter n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AJY5_BURM1 rbh
short chain fatty acid transporter rbh
Tax=BJP_IG2102_Syntrophobacterales_60_12
S24_scaffold_1164_curated_5
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3661..5061)
DNA (1401bp) protein (467aa)
PAS modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CKX4_SYNLT
Fis family PAS modulated sigma-54 specific transcriptional regulator
PAS modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ADI01359.1}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
S24_scaffold_1164_curated_trna_3
unknown

Not on your lists

comp(5178..5249)
DNA (72bp)
transferRNA Glu
S24_scaffold_1164_curated_trna_2
unknown

Not on your lists

comp(5268..5339)
DNA (72bp)
transferRNA Met
S24_scaffold_1164_curated_trna_1
unknown

Not on your lists

comp(5397..5468)
DNA (72bp)
transferRNA Asn
S24_scaffold_1164_curated_6
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5582..6682)
DNA (1101bp) protein (367aa)
RNA polymerase sigma factor SigA n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPB3_9FIRM rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
RNA polymerase, sigma 70 subunit, RpoD
S24_scaffold_1164_curated_7
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6731..8530)
DNA (1800bp) protein (600aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
DNA primase n=5 Tax=Pelosinus fermentans RepID=I8RDA7_9FIRM rbh
DNA primase
S24_scaffold_1164_curated_8
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8730..9080)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IJM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB26066.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
S24_scaffold_1164_curated_9
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

comp(9098..9703)
DNA (606bp) protein (202aa)
Putative metaldependent phosphohydrolase id=2893739 bin=GWC2_Clostridiales_40_7 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
metaldependent phosphohydrolase
Tax=GWC2_Clostridiales_40_7_curated
S24_scaffold_1164_curated_10
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9839..10357
DNA (519bp) protein (173aa)
OstA family protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NLE4_9FIRM
OstA family protein
OstA family protein {ECO:0000313|EMBL:AJQ29660.1}; Flags: Precursor;; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
Displaying 13 items

View Taxonomy