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S27_scaffold_7_curated

Search features with annotation key words

Displaying items 1-30 of 573 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S27_scaffold_7_curated_1
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1109)
DNA (1107bp) protein (369aa)
Methyl-accepting chemotaxis sensory transducer, class 34H n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74DL8_GEOSL
Chemotaxis protein {ECO:0000313|EMBL:KIE42684.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
mcp34H-2; methyl-accepting chemotaxis sensory transducer, class 34H
S27_scaffold_7_curated_2
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(1148..1648)
DNA (501bp) protein (167aa)
CheW protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5U0_GEOUR
putative CheW protein
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
S27_scaffold_7_curated_3
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1851..3566)
DNA (1716bp) protein (572aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Geobacter sp. (strain M21) RepID=C6E2Z3_GEOSM rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACT17166.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
S27_scaffold_7_curated_4
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3600..4106)
DNA (507bp) protein (169aa)
CheW protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E2Z4_GEOSM
chemotaxis protein CheW
CheW protein {ECO:0000313|EMBL:ACT17167.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
S27_scaffold_7_curated_5
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4329..6860)
DNA (2532bp) protein (844aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IH18_9FIRM rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor {ECO:0000313|EMBL:EQB25121.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
S27_scaffold_7_curated_6
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6962..9679)
DNA (2718bp) protein (906aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
multi-sensor hybrid histidine kinase n=1 Tax=Janthinobacterium lividum RepID=UPI000287AFA7 rbh
PAS domain S-box rbh
S27_scaffold_7_curated_7
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9795..10436)
DNA (642bp) protein (214aa)
Helix-turn-helix transcriptional response regulator, LuxR family n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74DM3_GEOSL
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AJE02936.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S27_scaffold_7_curated_8
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10606..11277)
DNA (672bp) protein (224aa)
Helix-turn-helix transcriptional response regulator, LuxR family n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74DM3_GEOSL
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIE42687.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
LuxR family transcriptional regulator
S27_scaffold_7_curated_9
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11264..13366)
DNA (2103bp) protein (701aa)
Putative two-component sensor histidine kinase, classical system putative bacteriophytochrome n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQ21_PHAMO rbh
Putative two-component sensor histidine kinase, classical system putative bacteriophytochrome {ECO:0000313|EMBL:CCG40459.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
PAS/PAC sensor signal transduction histidine kinase
S27_scaffold_7_curated_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13441..14022)
DNA (582bp) protein (194aa)
Methyltransferase type 12 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA36_GEOUR
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ABQ25566.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S27_scaffold_7_curated_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14019..14549)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB47_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25201.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S27_scaffold_7_curated_12
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14614..14958)
DNA (345bp) protein (115aa)
Putative uncharacterized protein id=3443814 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
S27_scaffold_7_curated_13
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15092..15835)
DNA (744bp) protein (248aa)
Putative uncharacterized protein id=4132921 bin=GWF2_Melainabacteria_37_15 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
membrane protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
S27_scaffold_7_curated_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(16006..17322)
DNA (1317bp) protein (439aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Peptidase M15D vanX D-ala-D-ala dipeptidase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTN5_9BACT
peptidase M15D vanX D-ala-D-ala dipeptidase
S27_scaffold_7_curated_15
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

17592..17987
DNA (396bp) protein (132aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M260_GEODF
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_7_curated_16
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

18129..18371
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9B2_GEODF
hypothetical protein
Tax=GWC2_Nitrospirae_57_9_curated
S27_scaffold_7_curated_17
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18785..20434)
DNA (1650bp) protein (550aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Hydroxylamine reductase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9C1_GEODF rbh
hydroxylamine reductase rbh
S27_scaffold_7_curated_18
unknown

Not on your lists

20623..20955
DNA (333bp) protein (111aa)

This feature has no annotations

S27_scaffold_7_curated_19
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20985..22259)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein id=2036363 bin=GWB2_Pelobacter_53_15 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE04159.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S27_scaffold_7_curated_20
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22286..24919)
DNA (2634bp) protein (878aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3) rbh
Multi-sensor hybrid histidine kinase n=1 Tax=Leptonema illini DSM 21528 RepID=H2CHQ1_9LEPT rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EHQ05896.1}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
S27_scaffold_7_curated_21
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25174..25965)
DNA (792bp) protein (264aa)
Type IV pilus assembly PilZ n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8V7_GEOUR
type IV pilus assembly PilZ
Tax=GWC2_Geobacteraceae_48_7_curated
S27_scaffold_7_curated_22
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26266..26451
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WR10_GEOS8
hypothetical protein
Tax=GWC2_Geobacteraceae_48_7_curated
S27_scaffold_7_curated_23
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26514..27389)
DNA (876bp) protein (292aa)
Fibronectin type III domain-containing protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WLA0_GEOS8
fibronectin type III domain-containing protein
Tax=GWC2_Geobacteraceae_53_11_curated
S27_scaffold_7_curated_24
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27664..29289
DNA (1626bp) protein (542aa)
Fumarate hydratase, class I n=2 Tax=Geobacter metallireducens RepID=Q39SI5_GEOMG rbh
Fumarate hydratase class I, anaerobic {ECO:0000313|EMBL:GAM10118.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
fumB; fumarate hydratase rbh
S27_scaffold_7_curated_25
unknown

Not on your lists

29612..30184
DNA (573bp) protein (191aa)

This feature has no annotations

S27_scaffold_7_curated_26
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30225..30677)
DNA (453bp) protein (151aa)
Putative uncharacterized protein id=2024438 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Tax=GWD2_Desulfuromonadales_54_10_curated
S27_scaffold_7_curated_27
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30827..31117
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E981_GEOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE02381.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S27_scaffold_7_curated_28
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31215..31682)
DNA (468bp) protein (156aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
Bacterioferritin n=2 Tax=Geobacter metallireducens RepID=Q39UD7_GEOMG
bacterioferritin
S27_scaffold_7_curated_29
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31916..32392
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7C1_GEOLS
Membrane protein {ECO:0000313|EMBL:KIH76641.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
hypothetical protein
S27_scaffold_7_curated_30
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32372..32860)
DNA (489bp) protein (163aa)
Putative uncharacterized protein id=3447227 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
Displaying items 1-30 of 573 in total

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