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S27_scaffold_24_curated

Search features with annotation key words

Displaying items 1-30 of 429 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S27_scaffold_24_curated_1
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55..1353
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RV24_ACCPU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV35103.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
S27_scaffold_24_curated_2
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(1604..2095)
DNA (492bp) protein (164aa)
Putative uncharacterized protein id=4168219 bin=GWC2_Nitrospirae-rel_56_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
lipoprotein
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_24_curated_3
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2314..4308
DNA (1995bp) protein (665aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Sensor histidine kinase, PAS, GAF and GAF domain-containing n=2 Tax=Geobacter metallireducens RepID=Q39RF1_GEOMG
sensor histidine kinase, PAS, GAF and GAF domain-containing
S27_scaffold_24_curated_4
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4471..5316)
DNA (846bp) protein (282aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZG8_GEODF rbh
ErfK/YbiS/YcfS/YnhG family protein rbh
Peptidoglycan L,D-transpeptidase, YkuD family {ECO:0000313|EMBL:ACM20721.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S27_scaffold_24_curated_5
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5585..6607
DNA (1023bp) protein (341aa)
Uncharacterized protein id=2211482 bin=GWB2_Geobacter-like_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
hypothetical protein rbh
Tax=GWB2_Geobacteraceae_52_12_curated
S27_scaffold_24_curated_6
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6628..7662
DNA (1035bp) protein (345aa)
Thioredoxin domain protein id=2211484 bin=GWB2_Geobacter-like_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
thioredoxin domain-containing protein rbh
Tax=GWB2_Geobacteraceae_52_12_curated
S27_scaffold_24_curated_7
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7881..8294)
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=2032579 bin=GWB2_Geobacter-like_52_12 species=Thiorhodococcus drewsii genus=Thiorhodococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Geobacteraceae_52_12_curated
S27_scaffold_24_curated_8
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8400..8984)
DNA (585bp) protein (195aa)
Transcriptional regulator, TetR family n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74F39_GEOSL
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AJE04316.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S27_scaffold_24_curated_9
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9232..10449
DNA (1218bp) protein (406aa)
Tax=BJP_IG2157_Desulfuromonadales_56_134
S27_scaffold_24_curated_10
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10649..11368
DNA (720bp) protein (240aa)
Tax=BJP_IG2157_Desulfuromonadales_56_134
S27_scaffold_24_curated_11
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11377..12789
DNA (1413bp) protein (471aa)
Tax=CG_Delta_02
S27_scaffold_24_curated_12
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12786..14291
DNA (1506bp) protein (502aa)
Tax=CG_Delta_02
S27_scaffold_24_curated_13
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14288..15043
DNA (756bp) protein (252aa)
id=3111981 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=BJP_IG2157_Desulfuromonadales_56_134
S27_scaffold_24_curated_14
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

15071..15832
DNA (762bp) protein (254aa)
id=3111981 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_24_curated_15
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

15943..17238
DNA (1296bp) protein (432aa)
Gll1759 protein id=3111991 bin=GWC2_Nitrospirae-rel_56_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
Na+/H+ antiporter rbh
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_24_curated_16
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

17531..18616
DNA (1086bp) protein (362aa)
Putative uncharacterized protein id=3797975 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_24_curated_17
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

18674..18889
DNA (216bp) protein (72aa)
id=3797973 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_24_curated_18
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(19116..19517)
DNA (402bp) protein (134aa)
id=3797972 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_24_curated_19
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

19869..21005
DNA (1137bp) protein (379aa)
Peptidase T-like protein id=3797970 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
peptidase T-like protein rbh
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_24_curated_20
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

21002..21472
DNA (471bp) protein (157aa)
Methylglyoxal synthase id=3797968 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
methylglyoxal synthase
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_24_curated_21
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(21516..22658)
DNA (1143bp) protein (381aa)
Glucose/sorbosone dehydrogenase-like protein id=3797966 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
glucose/sorbosone dehydrogenase-like protein
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_24_curated_22
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(22706..23635)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00030E8314 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJH72680.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein rbh
S27_scaffold_24_curated_23
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23777..24172)
DNA (396bp) protein (132aa)
Pyridoxamine-5'-phosphate oxidase-related FMN-binding protein id=2062701 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Tax=GWD2_Desulfuromonadales_54_10_curated
S27_scaffold_24_curated_24
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24306..25502)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036BCBC3 rbh
Galactoside permease {ECO:0000313|EMBL:GAM11466.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
major facilitator superfamily transporter rbh
S27_scaffold_24_curated_25
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25784..27001)
DNA (1218bp) protein (406aa)
Ammonium transporter, putative n=2 Tax=Geobacter sulfurreducens RepID=D7AI02_GEOSK rbh
ammonium transporter rbh
Ammonium transporter, putative {ECO:0000313|EMBL:AAR34597.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S27_scaffold_24_curated_26
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27350..29659
DNA (2310bp) protein (770aa)
Sensor histidine kinase response regulator, HAMP and PAS domain-containing n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ECB8_GEOBB
HAMP/PAS domain-containing sensor histidine kinase response regulator
Tax=GWC2_Geobacteraceae_53_11_curated
S27_scaffold_24_curated_27
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29835..32969
DNA (3135bp) protein (1045aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M709_GEODF rbh
PAS/PAC sensor signal transduction histidine kinase rbh
S27_scaffold_24_curated_28
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32966..34399
DNA (1434bp) protein (478aa)
Sigma-54-dependent transcriptional response regulator n=2 Tax=Geobacter metallireducens RepID=Q39WQ2_GEOMG rbh
sigma-54-dependent transcriptional response regulator rbh
Sigma-54-dependent transcriptional response regulator {ECO:0000313|EMBL:ABB31322.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S27_scaffold_24_curated_29
unknown

Not on your lists

34638..34943
DNA (306bp) protein (102aa)

This feature has no annotations

S27_scaffold_24_curated_30
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34958..37054
DNA (2097bp) protein (699aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Sensor histidine kinase CheA associated with MCPs of class 36H n=2 Tax=Geobacter metallireducens RepID=Q39WQ4_GEOMG rbh
cheA36H; sensor histidine kinase CheA associated with MCPs of class 36H rbh
Displaying items 1-30 of 429 in total

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