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S27_scaffold_18_curated

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Displaying items 1-30 of 196 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S27_scaffold_18_curated_1
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1046)
DNA (1044bp) protein (348aa)
SSS sodium solute transporter superfamily n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPP6_GEOS8
SSS sodium solute transporter superfamily protein
Tax=GWC2_Geobacteraceae_55_20_curated
S27_scaffold_18_curated_2
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1058..1366)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZD0_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM20683.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S27_scaffold_18_curated_3
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1500..2270)
DNA (771bp) protein (257aa)
Transcriptional regulator, IclR family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9Y7_GEOUR rbh
Transcriptional regulator KdgR {ECO:0000313|EMBL:GAM11789.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
regulatory protein IclR rbh
S27_scaffold_18_curated_4
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2741..3484
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein Gmet_0743 n=2 Tax=Geobacter metallireducens RepID=Y743_GEOMG rbh
hypothetical protein rbh
Probable transcriptional regulatory protein Gmet_0743 {ECO:0000255|HAMAP-Rule:MF_00693}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S27_scaffold_18_curated_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3788..4207
DNA (420bp) protein (140aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; EC=3.1.22.4 {ECO:0000255|HAMAP-Rule:MF_00034};; Holliday junction nuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RUVC_GEODF
S27_scaffold_18_curated_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4204..4806
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9Y3_GEOUR
ruvA; Holliday junction DNA helicase RuvA
S27_scaffold_18_curated_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4822..5838
DNA (1017bp) protein (339aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4) rbh
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RUVB_GEOUR rbh
S27_scaffold_18_curated_8
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5839..6564
DNA (726bp) protein (242aa)
DnaA regulatory inactivator Hda n=2 Tax=Geobacter metallireducens RepID=Q39XN5_GEOMG rbh
hda; DnaA regulatory inactivator Hda rbh
DnaA regulatory inactivator Hda {ECO:0000313|EMBL:ABB30989.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S27_scaffold_18_curated_9
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6561..7124
DNA (564bp) protein (188aa)
Putative uncharacterized protein id=1753135 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
S27_scaffold_18_curated_10
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7121..7333
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZB9_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM20672.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S27_scaffold_18_curated_11
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7425..7742
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZB8_GEODF
hypothetical protein
Phasin superfamily protein {ECO:0000313|EMBL:ACM20671.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S27_scaffold_18_curated_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7736..9421
DNA (1686bp) protein (562aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
2-octaprenylphenol hydroxylase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9Z8_GEOUR rbh
hypothetical protein rbh
S27_scaffold_18_curated_13
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9644..10561
DNA (918bp) protein (306aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000255|HAMAP-Rule:MF_00388}; EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_00388};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000255|HAMAP-Rule:MF_00388}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Geobacter sp. (strain M21) RepID=LPXC_GEOSM rbh
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase rbh
S27_scaffold_18_curated_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10730..12967
DNA (2238bp) protein (746aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA24_GEOUR rbh
multi-sensor signal transduction histidine kinase rbh
S27_scaffold_18_curated_15
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13006..13758)
DNA (753bp) protein (251aa)
GAF domain protein, putative n=2 Tax=Geobacter metallireducens RepID=Q39SE1_GEOMG
GAF domain-containing protein
GAF domain protein, putative {ECO:0000313|EMBL:ABB32833.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S27_scaffold_18_curated_16
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13958..16633)
DNA (2676bp) protein (892aa)
UPF0182 protein GM21_2279 id=1938208 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
hypothetical protein rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S27_scaffold_18_curated_17
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16643..17818)
DNA (1176bp) protein (392aa)
Aldolase domain protein n=2 Tax=Geobacter sulfurreducens RepID=D7AL95_GEOSK rbh
aldolase domain-containing protein rbh
Aldolase {ECO:0000313|EMBL:AJY68428.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
S27_scaffold_18_curated_18
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17998..19737)
DNA (1740bp) protein (580aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5) rbh
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:ABQ27428.1}; EC=1.2.7.5 {ECO:0000313|EMBL:ABQ27428.1};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Aldehyde ferredoxin oxidoreductase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6L0_GEOUR rbh
S27_scaffold_18_curated_19
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19765..20841)
DNA (1077bp) protein (359aa)
Mannose-6-phosphate isomerase, type 2 {ECO:0000313|EMBL:ABQ27429.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ABQ27429.1};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Mannose-6-phosphate isomerase, type 2 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6L1_GEOUR rbh
nucleotidyl transferase rbh
S27_scaffold_18_curated_20
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21139..21903)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCU6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24596.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S27_scaffold_18_curated_21
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(21906..22622)
DNA (717bp) protein (239aa)
Transport-associated protein id=3261201 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
transporter
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_18_curated_22
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(22830..23339)
DNA (510bp) protein (170aa)
Lipocalin family protein id=3261200 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
lipocalin rbh
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_18_curated_23
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23429..25111)
DNA (1683bp) protein (561aa)
Proton/sulfate symporter family protein n=3 Tax=Bacteria RepID=D7AMD3_GEOSK rbh
proton/sulfate symporter family protein rbh
Proton/sulfate symporter family protein {ECO:0000313|EMBL:AAR35688.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S27_scaffold_18_curated_24
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25116..25673)
DNA (558bp) protein (186aa)
YeeE/YedE family protein n=3 Tax=Bacteria RepID=D7AMD2_GEOSK rbh
YeeE/YedE family protein rbh
YeeE/YedE family protein {ECO:0000313|EMBL:AAR35687.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S27_scaffold_18_curated_25
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25675..26193)
DNA (519bp) protein (173aa)
YeeE/YedE family protein n=2 Tax=Geobacter sulfurreducens RepID=D7AMD1_GEOSK
YeeE/YedE family protein
YeeE/YedE family lipoprotein {ECO:0000313|EMBL:AAR35686.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S27_scaffold_18_curated_26
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26212..27630)
DNA (1419bp) protein (473aa)
Metal-dependent hydrolase, beta-lactamase superfamily n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74AP3_GEOSL rbh
metal-dependent hydrolase rbh
Metal-dependent hydrolase, beta-lactamase superfamily {ECO:0000313|EMBL:AAR35685.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S27_scaffold_18_curated_27
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(27690..28679)
DNA (990bp) protein (330aa)
hypothetical protein AlS89_04931 id=3261199 bin=GWC2_Nitrospirae-rel_56_14 species=Microbulbifer agarilyticus genus=Microbulbifer taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
S27_scaffold_18_curated_28
unknown

Not on your lists

comp(28875..29576)
DNA (702bp) protein (234aa)

This feature has no annotations

S27_scaffold_18_curated_29
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29914..45126)
DNA (15213bp) protein (5071aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYN1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CAJ72196.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
RCC1 repeat-containing protein rbh
S27_scaffold_18_curated_30
unknown

Not on your lists

comp(45270..45512)
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying items 1-30 of 196 in total

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